Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25427 Brassica carinata HOM05D000197 ORTHO05D000114 3.3e-39 164.5 77 100.0
C05p13030 Brassica napus HOM05D000197 ORTHO05D000114 5.5e-26 120.6 58 98.3
A06p10980 Brassica napus HOM05D000197 ORTHO05D000114 1.8e-24 115.5 58 94.8
BraA06t24277Z Brassica rapa HOM05D000197 ORTHO05D000114 1.8e-24 115.5 58 94.8
AT1G14960 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 1.1e-18 96.3 58 74.1
AL1G27020 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.9e-18 95.5 58 72.4
BcaC05g25426 Brassica carinata HOM05D000197 ORTHO05D000114 2.5e-18 95.1 74 58.1
BolC5t30047H Brassica oleracea HOM05D000197 ORTHO05D000114 2.5e-18 95.1 74 58.1
C05p13020 Brassica napus HOM05D000197 ORTHO05D000114 3.2e-18 94.7 73 57.5
AL1G27010 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 4.6e-17 90.9 58 70.7
CARHR015480 Cardamine hirsuta HOM05D000197 ORTHO05D000114 1.0e-16 89.7 58 70.7
Carub.0001s1472 Capsella rubella HOM05D000197 ORTHO05D000114 1.8e-16 89.0 58 67.2
BcaC09g50956 Brassica carinata HOM05D000197 ORTHO05D000114 2.3e-16 88.6 56 69.6
C01p18830 Brassica napus HOM05D000197 ORTHO05D000114 2.3e-16 88.6 56 69.6
BolC1t01810H Brassica oleracea HOM05D000197 ORTHO05D000114 2.3e-16 88.6 56 69.6
BcaB03g12405 Brassica carinata HOM05D003744 ORTHO05D004327 3.0e-16 88.2 64 59.4
BcaC07g41521 Brassica carinata HOM05D000197 ORTHO05D000114 3.0e-16 88.2 58 69.0
BolC8t52078H Brassica oleracea HOM05D000197 ORTHO05D000114 3.0e-16 88.2 58 69.0
AT1G14950 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 3.9e-16 87.8 58 67.2
Thhalv10026372m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 6.7e-16 87.0 58 65.5
BraA08t34148Z Brassica rapa HOM05D000197 ORTHO05D000114 8.7e-16 86.7 56 67.9
THA.LOC104823801 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 8.7e-16 86.7 56 71.4
A08p21960 Brassica napus HOM05D000197 ORTHO05D000114 3.3e-15 84.7 58 63.8
C03p80480 Brassica napus HOM05D000197 ORTHO05D000114 3.3e-15 84.7 58 63.8
BolC3t20294H Brassica oleracea HOM05D000197 ORTHO05D000114 4.3e-15 84.3 56 66.1
Aa31LG2G8380 Aethionema arabicum HOM05D000197 ORTHO05D000114 1.3e-14 82.8 56 66.1
Aa31LG2G8390 Aethionema arabicum HOM05D000197 ORTHO05D000114 1.3e-14 82.8 56 66.1
AL1G26980 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.6e-14 82.4 58 62.1
BcaNung01076 Brassica carinata HOM05D000197 ORTHO05D000114 1.6e-14 82.4 56 64.3
BcaC09g48106 Brassica carinata HOM05D000197 ORTHO05D000114 2.2e-14 82.0 56 62.5
C01p18840 Brassica napus HOM05D000197 ORTHO05D000114 2.2e-14 82.0 56 64.3
BolC1t05413H Brassica oleracea HOM05D000197 ORTHO05D000114 2.2e-14 82.0 56 62.5
Carub.0001s1473 Capsella rubella HOM05D000197 ORTHO05D000114 2.8e-14 81.6 58 60.3
Thhalv10005073m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 2.8e-14 81.6 58 67.2
AT3G26460 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 4.8e-14 80.9 55 65.5
A01p41970 Brassica napus HOM05D000197 ORTHO05D000114 4.8e-14 80.9 56 62.5
BraA01t04264Z Brassica rapa HOM05D000197 ORTHO05D000114 4.8e-14 80.9 56 62.5
THA.LOC104824137 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 4.8e-14 80.9 58 65.5
CARHR231040 Cardamine hirsuta HOM05D000197 ORTHO05D000114 6.3e-14 80.5 55 61.8
CARHR231050 Cardamine hirsuta HOM05D000197 ORTHO05D000114 8.2e-14 80.1 56 58.9
AL7G29680 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.1e-13 79.7 56 58.9
AT1G14940 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 1.1e-13 79.7 58 58.6
Thhalv10026489m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 1.1e-13 79.7 56 62.5
AL1G45410 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.4e-13 79.3 58 58.6
BcaC05g25102 Brassica carinata HOM05D000197 ORTHO05D000114 1.8e-13 79.0 58 60.3
BcaC09g50959 Brassica carinata HOM05D003744 ORTHO05D004327 1.8e-13 79.0 56 60.7
A01p14970 Brassica napus HOM05D000197 ORTHO05D000114 1.8e-13 79.0 56 60.7
C01p18770 Brassica napus HOM05D000197 ORTHO05D000114 1.8e-13 79.0 56 60.7
BolC1t01807H Brassica oleracea HOM05D000197 ORTHO05D000114 1.8e-13 79.0 56 60.7
BraA01t01438Z Brassica rapa HOM05D000197 ORTHO05D000114 1.8e-13 79.0 56 60.7
AL5G15240 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 2.4e-13 78.6 56 60.7
AT1G14930 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 3.1e-13 78.2 58 60.3
AT3G26450 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 3.1e-13 78.2 56 58.9
Carub.0001s1471 Capsella rubella HOM05D000197 ORTHO05D000114 3.1e-13 78.2 57 57.9
BcaC09g50958 Brassica carinata HOM05D000197 ORTHO05D000114 4.1e-13 77.8 56 62.5
BolC1t01809H Brassica oleracea HOM05D000197 ORTHO05D000114 4.1e-13 77.8 56 62.5
BcaNung01075 Brassica carinata HOM05D000197 ORTHO05D000114 5.3e-13 77.4 56 58.9
Aa31LG2G8370 Aethionema arabicum HOM05D000197 ORTHO05D000114 6.9e-13 77.0 57 59.6
C08p45300 Brassica napus HOM05D000197 ORTHO05D000114 6.9e-13 77.0 69 55.1
Carub.0005s0049 Capsella rubella HOM05D000197 ORTHO05D000114 6.9e-13 77.0 56 66.1
Thhalv10005071m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 6.9e-13 77.0 58 62.1
AL1G27000 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 9.1e-13 76.6 58 55.2
AT4G23670 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 9.1e-13 76.6 56 57.1
CARHR231070 Cardamine hirsuta HOM05D000197 ORTHO05D000114 9.1e-13 76.6 56 60.7
BcaC06g31295 Brassica carinata HOM05D000949 ORTHO05D000114 1.5e-12 75.9 58 60.3
BcaC06g34157 Brassica carinata HOM05D000197 ORTHO05D000114 1.5e-12 75.9 58 60.3
C07p32090 Brassica napus HOM05D000197 ORTHO05D000114 1.5e-12 75.9 58 60.3
Thhalv10005076m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 1.5e-12 75.9 58 62.1
AL5G10520 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 2.0e-12 75.5 56 62.5
AL5G13150 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 2.0e-12 75.5 56 62.5
AT1G30990 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 2.0e-12 75.5 57 57.9
AT2G01520 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 2.0e-12 75.5 56 62.5
CARHR015470 Cardamine hirsuta HOM05D000197 ORTHO05D000114 2.0e-12 75.5 58 55.2
A06p44360 Brassica napus HOM05D000197 ORTHO05D000114 2.6e-12 75.1 58 58.6
BraA06t27311Z Brassica rapa HOM05D000197 ORTHO05D000114 2.6e-12 75.1 58 58.6
AT4G23680 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 3.4e-12 74.7 56 58.9
BcaB07g30738 Brassica carinata HOM05D000197 ORTHO05D000114 3.4e-12 74.7 56 60.7
Carub.0007s1744 Capsella rubella HOM05D000197 ORTHO05D000114 4.5e-12 74.3 56 57.1
Sp7g21600 Schrenkiella parvula HOM05D000197 ORTHO05D000114 4.5e-12 74.3 56 55.4
A03p54650 Brassica napus HOM05D000197 ORTHO05D000114 5.9e-12 73.9 56 58.9
BolC7t43748H Brassica oleracea HOM05D000197 ORTHO05D000114 5.9e-12 73.9 58 58.6
BraA03t14532Z Brassica rapa HOM05D000197 ORTHO05D000114 5.9e-12 73.9 56 58.9
BraA09t37946Z Brassica rapa HOM05D000197 ORTHO05D000114 7.7e-12 73.6 58 58.6
CARHR147290 Cardamine hirsuta HOM05D000197 ORTHO05D000114 7.7e-12 73.6 55 61.8
BcaB07g30736 Brassica carinata HOM05D000197 ORTHO05D000114 1.0e-11 73.2 58 58.6
AT4G14060 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 1.7e-11 72.4 58 58.6
CARHR144080 Cardamine hirsuta HOM05D000197 ORTHO05D000114 1.7e-11 72.4 56 58.9
A09p23460 Brassica napus HOM05D000197 ORTHO05D000114 2.2e-11 72.0 58 56.9
C09p30250 Brassica napus HOM05D000197 ORTHO05D000114 2.2e-11 72.0 58 56.9
BolC9t55889H Brassica oleracea HOM05D000197 ORTHO05D000114 2.2e-11 72.0 58 56.9
AL7G29690 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 2.9e-11 71.6 55 58.2
AL5G10550 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 3.8e-11 71.2 58 51.7
BcaC03g17050 Brassica carinata HOM05D000197 ORTHO05D000114 3.8e-11 71.2 58 58.6
A02p32140 Brassica napus HOM05D000197 ORTHO05D000114 3.8e-11 71.2 58 58.6
C02p49690 Brassica napus HOM05D000197 ORTHO05D000114 3.8e-11 71.2 58 58.6
BolC2t11049H Brassica oleracea HOM05D000197 ORTHO05D000114 3.8e-11 71.2 58 58.6
BolC2t11050H Brassica oleracea HOM05D000197 ORTHO05D000114 3.8e-11 71.2 58 58.6
BraA02t08227Z Brassica rapa HOM05D000197 ORTHO05D000114 3.8e-11 71.2 58 58.6
BcaC04g21575 Brassica carinata HOM05D000197 ORTHO05D000114 5.0e-11 70.9 58 56.9
AL7G42370 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 6.5e-11 70.5 58 56.9
AT2G01530 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 6.5e-11 70.5 58 51.7
Carub.0005s0445 Capsella rubella HOM05D000197 ORTHO05D000114 6.5e-11 70.5 55 54.5
BcaB07g30391 Brassica carinata HOM05D000197 ORTHO05D000114 1.1e-10 69.7 58 56.9
BcaC09g48107 Brassica carinata HOM05D000197 ORTHO05D000114 1.1e-10 69.7 58 50.0
A01p41980 Brassica napus HOM05D000197 ORTHO05D000114 1.1e-10 69.7 58 50.0
BolC1t05414H Brassica oleracea HOM05D000197 ORTHO05D000114 1.1e-10 69.7 58 50.0
BraA01t04266Z Brassica rapa HOM05D000197 ORTHO05D000114 1.1e-10 69.7 58 50.0
Carub.0007s1745 Capsella rubella HOM05D000197 ORTHO05D000114 1.1e-10 69.7 55 54.5
Carub.0005s0443 Capsella rubella HOM05D000197 ORTHO05D000114 1.4e-10 69.3 55 52.7
C03p80390 Brassica napus HOM05D000197 ORTHO05D000114 1.9e-10 68.9 63 49.2
BolC3t20287H Brassica oleracea HOM05D000197 ORTHO05D000114 1.9e-10 68.9 63 49.2
Carub.0005s0444 Capsella rubella HOM05D000197 ORTHO05D000114 4.2e-10 67.8 55 52.7
BolC7t45797H Brassica oleracea HOM05D000197 ORTHO05D000114 9.4e-10 66.6 60 55.0
BcaB03g14146 Brassica carinata HOM05D000197 ORTHO05D000114 1.2e-09 66.2 46 60.9
BolC1t01811H Brassica oleracea HOM05D000197 ORTHO05D000114 1.6e-09 65.9 56 55.4
A03p54640 Brassica napus HOM05D000197 ORTHO05D000114 2.1e-09 65.5 56 50.0
BraA03t14531Z Brassica rapa HOM05D000197 ORTHO05D000114 2.1e-09 65.5 56 50.0
Carub.0005s0446 Capsella rubella HOM05D000197 ORTHO05D000114 2.1e-09 65.5 55 50.9
BcaNung03440 Brassica carinata HOM05D000197 ORTHO05D000114 2.3e-08 62.0 56 48.2
C07p52960 Brassica napus HOM05D000197 ORTHO05D000114 2.3e-08 62.0 56 48.2
BolC7t45795H Brassica oleracea HOM05D000197 ORTHO05D000114 2.3e-08 62.0 56 48.2
Sp7g21610 Schrenkiella parvula HOM05D000197 ORTHO05D000114 6.7e-08 60.5 35 68.6
THA.LOC104823795 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 4.4e-07 57.8 64 45.3
COL.COLO4_25084 Corchorus olitorius HOM05D000197 ORTHO05D000114 2.2e-06 55.5 58 39.7
MELO3C015002.2 Cucumis melo HOM05D000197 ORTHO05D000114 4.8e-06 54.3 55 43.6


User provided reference genes

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