Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25351 Brassica carinata HOM05D000001 ORTHO05D011545 5.3e-79 297.7 162 100.0
A06p10500 Brassica napus HOM05D000001 ORTHO05D011545 4.2e-28 128.6 128 59.4
Thhalv10009648m.g Eutrema salsugineum HOM05D000001 ORTHO05D010340 5.2e-26 121.7 122 58.2
C05p12300 Brassica napus HOM05D000001 ORTHO05D011545 2.0e-22 109.8 51 98.0
AL1G26370 Arabidopsis lyrata HOM05D000001 ORTHO05D010340 6.5e-21 104.8 122 55.7
Sp1g12840 Schrenkiella parvula HOM05D000001 ORTHO05D010340 3.2e-20 102.4 122 57.4
Carub.0001s1419 Capsella rubella HOM05D000001 ORTHO05D010340 1.2e-19 100.5 122 52.5
Glyma.02G223800 Glycine max HOM05D000001 ORTHO05D010340 5.2e-18 95.1 122 40.2
THA.LOC104824092 Tarenaya hassleriana HOM05D000001 ORTHO05D010340 2.0e-17 93.2 122 51.6
BcaB02g06497 Brassica carinata HOM05D000001 ORTHO05D011545 3.4e-17 92.4 131 49.6
Phvul.006G221900 Phaseolus vulgaris HOM05D000001 ORTHO05D010340 4.8e-16 88.6 122 38.5
Duzib235G0779 Durio zibethinus HOM05D000001 ORTHO05D010340 8.3e-16 87.8 123 39.8
BolC5t29982H Brassica oleracea HOM05D000001 ORTHO05D011545 7.0e-15 84.7 41 87.8
Psat1g223640 Pisum sativum HOM05D000001 ORTHO05D010340 1.6e-14 83.6 125 45.6
Lj3g0020944 Lotus japonicus HOM05D000001 ORTHO05D010340 2.7e-14 82.8 122 45.9
TPR.G30665 Trifolium pratense HOM05D000001 ORTHO05D010340 4.5e-14 82.0 125 45.6
Medtr7g078420 Medicago truncatula HOM05D000001 ORTHO05D010340 1.0e-13 80.9 125 46.4
Medtr7g078360 Medicago truncatula HOM05D000001 ORTHO05D010340 2.2e-13 79.7 120 47.5
Thecc.06G063400 Theobroma cacao HOM05D000001 ORTHO05D010340 2.9e-13 79.3 124 36.3
Lalb_Chr20g0122421 Lupinus albus HOM05D000001 ORTHO05D010340 1.5e-12 77.0 119 42.9
CARHR014930 Cardamine hirsuta HOM05D000001 ORTHO05D010340 9.5e-12 74.3 93 46.2
Ca_00442_v3 Cicer arietinum L. HOM05D000001 ORTHO05D010340 6.1e-11 71.6 79 53.2
Glyma.14G190532 Glycine max HOM05D000001 ORTHO05D011545 9.8e-09 64.3 51 49.0
Cpa.g.sc1158.3 Carica papaya HOM05D000001 ORTHO05D010340 1.3e-08 63.9 39 64.1
Hma1.2p1_0157F.1_g069200 Hydrangea macrophylla HOM05D000001 ORTHO05D010340 1.4e-07 60.5 120 38.3
Lj9C211T2 Lonicera japonica HOM05D000001 ORTHO05D011014 9.2e-07 57.8 102 36.3
DCAR_003271 Daucus carota HOM05D000001 ORTHO05D010340 1.6e-06 57.0 120 36.7
Lalb_Chr04g0259091 Lupinus albus HOM05D000001 ORTHO05D009857 3.5e-06 55.8 102 34.3
Carub.0008s1663 Capsella rubella HOM05D000001 ORTHO05D009857 5.9e-06 55.1 104 37.5
Prupe.1G503500 Prunus persica HOM05D000001 ORTHO05D000003 7.7e-06 54.7 47 48.9
GSVIVG01007645001 Vitis vinifera HOM05D000001 ORTHO05D000003 7.7e-06 54.7 103 31.1


User provided reference genes

Program Settings