Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25180 Brassica carinata HOM05D001263 ORTHO05D001120 1.4e-37 159.1 80 100.0
BcaC05g25181 Brassica carinata HOM05D001263 ORTHO05D001120 1.4e-37 159.1 80 100.0
BcaC05g25179 Brassica carinata HOM05D001263 ORTHO05D001120 5.5e-37 157.1 79 98.7
C05p10690 Brassica napus HOM05D001263 ORTHO05D001120 5.5e-37 157.1 79 98.7
C05p10700 Brassica napus HOM05D001263 ORTHO05D001120 5.5e-37 157.1 79 98.7
BolC5t29811H Brassica oleracea HOM05D001263 ORTHO05D001120 5.5e-37 157.1 79 98.7
BraA06t24097Z Brassica rapa HOM05D001263 ORTHO05D001120 4.5e-31 137.5 79 89.9
A06p09100 Brassica napus HOM05D001263 ORTHO05D001120 2.9e-30 134.8 79 87.3
BcaC05g25134 Brassica carinata HOM05D001263 ORTHO05D001120 7.9e-28 126.7 79 82.3
BcaC07g41695 Brassica carinata HOM05D000866 ORTHO05D000673 1.3e-22 109.4 81 72.8
C08p47300 Brassica napus HOM05D000866 ORTHO05D000673 1.3e-22 109.4 81 72.8
BolC8t52272H Brassica oleracea HOM05D000866 ORTHO05D000673 1.3e-22 109.4 81 72.8
Sp1g11120 Schrenkiella parvula HOM05D001263 ORTHO05D001120 2.2e-22 108.6 81 72.8
Carub.0001s1223 Capsella rubella HOM05D001263 ORTHO05D001120 1.8e-19 99.0 79 67.1
A09p63800 Brassica napus HOM05D000866 ORTHO05D000673 5.1e-19 97.4 82 69.5
AT1G12540 Arabidopsis thaliana HOM05D001263 ORTHO05D001120 1.7e-17 92.4 81 59.3
AL1G23890 Arabidopsis lyrata HOM05D001263 ORTHO05D001120 8.2e-17 90.1 82 62.2
Thhalv10009922m.g Eutrema salsugineum HOM05D001263 ORTHO05D001120 9.1e-16 86.7 81 65.4
BraA09t41727Z Brassica rapa HOM05D000866 ORTHO05D000673 8.5e-14 80.1 79 62.0
Aa31LG1G2110 Aethionema arabicum HOM05D001263 ORTHO05D001120 3.1e-08 61.6 80 48.8


User provided reference genes

Program Settings