Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25168 Brassica carinata HOM05D007482 ORTHO05D003038 7.1e-68 260.4 124 100.0
C05p10620 Brassica napus HOM05D007482 ORTHO05D003038 1.5e-46 189.5 89 100.0
BolC5t29804H Brassica oleracea HOM05D007482 ORTHO05D003038 1.5e-46 189.5 89 100.0
A06p09020 Brassica napus HOM05D007482 ORTHO05D003038 9.1e-39 163.7 90 86.7
BraA06t24091Z Brassica rapa HOM05D007482 ORTHO05D003038 9.1e-39 163.7 90 86.7
BcaC05g25122 Brassica carinata HOM05D007482 ORTHO05D003038 7.2e-36 154.1 92 83.7
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 6.5e-29 131.0 93 68.8
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 4.5e-22 108.2 102 57.8
BcaB08g34260 Brassica carinata HOM05D007482 ORTHO05D003038 3.8e-21 105.1 99 53.5
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 5.5e-20 101.3 129 44.2
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 9.4e-20 100.5 99 52.5
A06p32510 Brassica napus HOM05D007482 ORTHO05D003038 9.4e-20 100.5 99 52.5
C03p60060 Brassica napus HOM05D007482 ORTHO05D003038 9.4e-20 100.5 99 52.5
BolC3t18270H Brassica oleracea HOM05D007482 ORTHO05D003038 2.1e-19 99.4 121 47.9
BcaB08g34259 Brassica carinata HOM05D007482 ORTHO05D003038 2.7e-19 99.0 99 50.5
C08p47220 Brassica napus HOM05D007482 ORTHO05D003038 2.7e-19 99.0 99 50.5
BolC8t52261H Brassica oleracea HOM05D007482 ORTHO05D003038 2.7e-19 99.0 99 50.5
BraA06t26175Z Brassica rapa HOM05D007482 ORTHO05D003038 4.7e-19 98.2 117 47.9
Sp1g11250 Schrenkiella parvula HOM05D007482 ORTHO05D003038 4.7e-19 98.2 99 52.5
BolC8t52262H Brassica oleracea HOM05D007482 ORTHO05D003038 6.1e-19 97.8 99 49.5
BolC8t52263H Brassica oleracea HOM05D007482 ORTHO05D003038 8.0e-19 97.4 99 49.5
A09p63720 Brassica napus HOM05D007482 ORTHO05D003038 1.8e-18 96.3 99 51.5
BraA09t41720Z Brassica rapa HOM05D007482 ORTHO05D003038 1.8e-18 96.3 99 51.5
Thhalv10009322m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 4.0e-18 95.1 103 48.5
C08p47230 Brassica napus HOM05D007482 ORTHO05D003038 6.8e-18 94.4 128 43.8
Carub.0001s1235 Capsella rubella HOM05D007482 ORTHO05D003038 8.3e-16 87.4 100 49.0
AT1G12660 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 9.1e-15 84.0 101 46.5
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 3.5e-14 82.0 86 39.5
CARHR012970 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.2e-13 79.3 100 41.0
AL1G24120 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 8.5e-13 77.4 96 41.7
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 7.2e-12 74.3 105 36.2
Sp1g11270 Schrenkiella parvula HOM05D007482 ORTHO05D003038 7.2e-12 74.3 116 33.6
Thhalv10009942m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 9.4e-12 73.9 98 37.8
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 1.2e-11 73.6 92 41.3
BolC8t52259H Brassica oleracea HOM05D007482 ORTHO05D003038 1.2e-11 73.6 114 35.1
BraA05t21798Z Brassica rapa HOM05D007482 ORTHO05D003038 2.7e-11 72.4 104 35.6
A05p29150 Brassica napus HOM05D007482 ORTHO05D003038 3.6e-11 72.0 104 35.6
A05p29160 Brassica napus HOM05D007482 ORTHO05D003038 4.7e-11 71.6 126 31.7
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 4.7e-11 71.6 108 34.3
C05p44560 Brassica napus HOM05D007482 ORTHO05D003038 8.0e-11 70.9 104 34.6
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 2.3e-10 69.3 100 35.0
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 2.3e-10 69.3 114 30.7
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 2.3e-10 69.3 104 33.7
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 2.3e-10 69.3 114 30.7
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.3e-10 69.3 103 41.7
C05p44570 Brassica napus HOM05D007482 ORTHO05D003038 3.0e-10 68.9 105 35.2
BolC5t33184H Brassica oleracea HOM05D007482 ORTHO05D003038 3.0e-10 68.9 105 35.2
AL1G24160 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 4.0e-10 68.6 104 33.7
CARHR035990 Cardamine hirsuta HOM05D007482 ORTHO05D003038 4.0e-10 68.6 101 42.6
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 4.0e-10 68.6 90 36.7
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 5.2e-10 68.2 108 33.3
BolC5t33183H Brassica oleracea HOM05D007482 ORTHO05D003038 5.2e-10 68.2 104 33.7
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 5.2e-10 68.2 108 33.3
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 6.8e-10 67.8 93 36.6
BcaC05g28380 Brassica carinata HOM05D007482 ORTHO05D003038 1.2e-09 67.0 99 33.3
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.2e-09 67.0 92 35.9
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 1.5e-09 66.6 103 30.1
BcaB07g32750 Brassica carinata HOM05D007482 ORTHO05D003038 2.0e-09 66.2 97 33.0
Thhalv10017433m.g Eutrema salsugineum HOM05D007482 ORTHO05D016827 3.4e-09 65.5 101 41.6
Carub.0001s1238 Capsella rubella HOM05D007482 ORTHO05D003038 4.4e-09 65.1 109 28.4
Thhalv10019701m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.3e-08 63.5 100 40.0
BraA05t21800Z Brassica rapa HOM05D007482 ORTHO05D003038 2.2e-08 62.8 126 30.2
BraA09t39063Z Brassica rapa HOM05D007482 ORTHO05D003038 2.2e-08 62.8 103 29.1
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 2.2e-08 62.8 74 41.9
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 3.7e-08 62.0 109 37.6
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 3.7e-08 62.0 112 38.4
Thhalv10019821m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 4.9e-08 61.6 91 40.7
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 8.3e-08 60.8 103 35.9
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 8.3e-08 60.8 89 37.1
Sp1g11260 Schrenkiella parvula HOM05D007482 ORTHO05D003038 1.1e-07 60.5 105 39.0
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 1.4e-07 60.1 88 30.7
C08p47180 Brassica napus HOM05D007482 ORTHO05D003038 2.4e-07 59.3 87 34.5
BraA09t41719Z Brassica rapa HOM05D007482 ORTHO05D003038 3.1e-07 58.9 111 36.0
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 7.0e-07 57.8 86 33.7
A09p63710 Brassica napus HOM05D007482 ORTHO05D003038 9.2e-07 57.4 115 34.8
A09p35320 Brassica napus HOM05D007482 ORTHO05D003038 1.2e-06 57.0 98 35.7
BraA09t39062Z Brassica rapa HOM05D007482 ORTHO05D003038 1.6e-06 56.6 95 35.8
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 3.5e-06 55.5 88 33.0
C05p30070 Brassica napus HOM05D007482 ORTHO05D003038 4.5e-06 55.1 96 32.3
BolC5t31743H Brassica oleracea HOM05D007482 ORTHO05D003038 4.5e-06 55.1 96 32.3
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 5.9e-06 54.7 85 35.3
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 7.7e-06 54.3 85 37.6


User provided reference genes

Program Settings