Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25151 Brassica carinata HOM05D007395 ORTHO05D009347 2.6e-70 268.9 161 100.0
C05p10450 Brassica napus HOM05D007395 ORTHO05D009347 1.2e-46 190.3 105 97.1
BolC5t29791H Brassica oleracea HOM05D007395 ORTHO05D009347 2.0e-38 162.9 138 74.6
BcaC07g41677 Brassica carinata HOM05D007395 ORTHO05D009347 2.4e-23 112.8 131 66.4
BolC8t52248H Brassica oleracea HOM05D007395 ORTHO05D009347 2.4e-23 112.8 131 66.4
BcaB08g34248 Brassica carinata HOM05D007395 ORTHO05D009347 1.2e-22 110.5 127 57.5
Thhalv10008746m.g Eutrema salsugineum HOM05D007395 ORTHO05D009347 2.9e-21 105.9 149 54.4
BolC8t50971H Brassica oleracea HOM05D007395 ORTHO05D009347 3.8e-21 105.5 131 63.4
BcaB03g13164 Brassica carinata HOM05D007395 ORTHO05D009347 9.4e-20 100.9 133 55.6
BcaC07g40271 Brassica carinata HOM05D007395 ORTHO05D009347 1.0e-18 97.4 124 62.1
C08p33720 Brassica napus HOM05D007395 ORTHO05D009347 1.0e-18 97.4 124 62.1
AT1G12830 Arabidopsis thaliana HOM05D007395 ORTHO05D009347 1.1e-17 94.0 148 54.1
AL1G24470 Arabidopsis lyrata HOM05D007395 ORTHO05D009347 3.3e-17 92.4 144 54.2
Carub.0001s1257 Capsella rubella HOM05D007395 ORTHO05D009347 1.3e-16 90.5 143 54.5
BolC8t49196H Brassica oleracea HOM05D007395 ORTHO05D009347 3.8e-13 79.0 134 51.5
CARHR013150 Cardamine hirsuta HOM05D007395 ORTHO05D009347 5.5e-12 75.1 100 52.0
Sp1g11400 Schrenkiella parvula HOM05D007395 ORTHO05D009347 1.6e-11 73.6 105 51.4
THA.LOC104805310 Tarenaya hassleriana HOM05D007395 ORTHO05D009347 3.6e-11 72.4 131 45.0
BraA09t41709Z Brassica rapa HOM05D007395 ORTHO05D009347 2.3e-10 69.7 127 52.8
C08p15690 Brassica napus HOM05D007395 ORTHO05D009347 5.2e-10 68.6 130 48.5
A09p63590 Brassica napus HOM05D007395 ORTHO05D009347 4.4e-09 65.5 128 51.6
Aa31LG1G1930 Aethionema arabicum HOM05D007395 ORTHO05D009347 5.7e-09 65.1 146 47.3
A08p32600 Brassica napus HOM05D007395 ORTHO05D009347 5.7e-09 65.1 126 48.4
BraA08t35184Z Brassica rapa HOM05D007395 ORTHO05D009347 5.7e-09 65.1 126 48.4
THA.LOC104825649 Tarenaya hassleriana HOM05D007395 ORTHO05D009347 7.4e-09 64.7 141 44.0
Prupe.3G311900 Prunus persica HOM05D007395 ORTHO05D009347 1.4e-07 60.5 123 35.0
Cpa.g.sc70.86 Carica papaya HOM05D007395 ORTHO05D009347 1.6e-06 57.0 147 34.7


User provided reference genes

Program Settings