Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25111 Brassica carinata HOM05D011236 ORTHO05D011378 3.0e-37 157.9 74 100.0
BcaC05g25152 Brassica carinata HOM05D011236 ORTHO05D011378 1.7e-32 142.1 74 90.5
C05p10460 Brassica napus HOM05D011236 ORTHO05D011378 1.7e-32 142.1 74 90.5
A06p08840 Brassica napus HOM05D011236 ORTHO05D011378 3.5e-30 134.4 75 86.7
BraA06t24079Z Brassica rapa HOM05D011236 ORTHO05D011378 3.5e-30 134.4 75 86.7
Sp1g11370 Schrenkiella parvula HOM05D011236 ORTHO05D011378 2.4e-26 121.7 74 77.0
C08p15650 Brassica napus HOM05D011236 ORTHO05D011378 1.7e-24 115.5 74 75.7
BolC8t49192H Brassica oleracea HOM05D011236 ORTHO05D011378 1.7e-24 115.5 74 75.7
BolC5t29792H Brassica oleracea HOM05D011236 ORTHO05D011378 2.9e-24 114.8 62 88.7
A08p32630 Brassica napus HOM05D011236 ORTHO05D011378 3.8e-24 114.4 74 74.3
BraA08t35187Z Brassica rapa HOM05D011236 ORTHO05D011378 3.8e-24 114.4 74 74.3
AL1G24440 Arabidopsis lyrata HOM05D011236 ORTHO05D011378 1.9e-23 112.1 74 71.6
Thhalv10009512m.g Eutrema salsugineum HOM05D011236 ORTHO05D011378 5.4e-23 110.5 74 73.0
AT1G12805 Arabidopsis thaliana HOM05D011236 ORTHO05D011378 1.6e-22 109.0 76 68.4
Carub.0001s1253 Capsella rubella HOM05D011236 ORTHO05D011378 6.6e-21 103.6 75 70.7
CARHR013120 Cardamine hirsuta HOM05D011236 ORTHO05D011378 2.1e-19 98.6 74 67.6
BcaB03g13167 Brassica carinata HOM05D011236 ORTHO05D011378 4.5e-17 90.9 61 72.1
Thecc.03G275600 Theobroma cacao HOM05D011589 ORTHO05D011378 2.1e-06 55.5 73 49.3
COL.COLO4_34429 Corchorus olitorius HOM05D011589 ORTHO05D011378 4.6e-06 54.3 77 45.5
Gohir.A09G192900 Gossypium hirsutum HOM05D011589 ORTHO05D011378 4.6e-06 54.3 73 41.1
Gorai.006G209900 Gossypium raimondii HOM05D011589 ORTHO05D011378 7.9e-06 53.5 75 42.7


User provided reference genes

Program Settings