Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25012 Brassica carinata HOM05D005683 ORTHO05D006958 3.9e-142 508.1 246 100.0
A06p08000 Brassica napus HOM05D005683 ORTHO05D006958 2.9e-137 491.9 246 95.9
BraA06t23999Z Brassica rapa HOM05D005683 ORTHO05D006958 2.9e-137 491.9 246 95.9
BolC5t29702H Brassica oleracea HOM05D005683 ORTHO05D006958 1.9e-133 479.2 248 94.4
C05p09600 Brassica napus HOM05D005683 ORTHO05D006958 3.6e-132 474.9 248 94.0
AL1G22470 Arabidopsis lyrata HOM05D005683 ORTHO05D006958 6.2e-124 447.6 252 86.9
Carub.0001s1101 Capsella rubella HOM05D005683 ORTHO05D006958 6.9e-123 444.1 251 86.5
CARHR011620 Cardamine hirsuta HOM05D005683 ORTHO05D006958 6.9e-123 444.1 255 86.7
AT1G11380 Arabidopsis thaliana HOM05D005683 ORTHO05D006958 2.3e-118 429.1 251 83.7
Aa31LG1G3330 Aethionema arabicum HOM05D005683 ORTHO05D006958 4.8e-116 421.4 253 83.0
THA.LOC104818970 Tarenaya hassleriana HOM05D005683 ORTHO05D006958 7.9e-103 377.5 243 75.3
Dinv40458 Davidia involucrata HOM05D005683 ORTHO05D006958 2.4e-83 312.8 228 63.6
QL05p080525 Quercus lobata HOM05D005683 ORTHO05D006958 5.9e-82 308.1 245 63.3
TAR629G3446 Trochodendron aralioides HOM05D005683 ORTHO05D006958 3.2e-80 302.4 238 61.8
GSVIVG01003677001 Vitis vinifera HOM05D005683 ORTHO05D006958 3.2e-80 302.4 238 60.1
Actinidia24049 Actinidia chinensis HOM05D005683 ORTHO05D006958 9.4e-80 300.8 217 64.5
Haze_06612 Corylus avellana HOM05D005683 ORTHO05D006958 2.1e-79 299.7 217 66.8
Eucgr.E03677 Eucalyptus grandis HOM05D005683 ORTHO05D006958 4.7e-79 298.5 206 64.6
CiPaw.10G115800 Carya illinoinensis HOM05D005683 ORTHO05D006958 8.0e-79 297.7 214 66.8
COL.COLO4_31635 Corchorus olitorius HOM05D005683 ORTHO05D006958 2.3e-78 296.2 247 60.3
Manes.17G032900 Manihot esculenta HOM05D005683 ORTHO05D006958 6.8e-78 294.7 223 64.1
TAR626G0062 Trochodendron aralioides HOM05D005683 ORTHO05D006958 5.7e-77 291.6 214 62.6
Manes.16G019184 Manihot esculenta HOM05D005683 ORTHO05D006958 7.5e-77 291.2 221 62.0
Sed0004151 Sechium edule HOM05D005683 ORTHO05D006958 7.5e-77 291.2 210 65.2
Atru.chr10.2035 Acer truncatum HOM05D005683 ORTHO05D006958 9.8e-77 290.8 214 63.6
AUR62012512 Chenopodium quinoa HOM05D005683 ORTHO05D006958 9.8e-77 290.8 239 58.6
Rhsim02G0118200 Rhododendron simsii HOM05D005683 ORTHO05D006958 9.8e-77 290.8 232 59.5
Rhsim02G0118400 Rhododendron simsii HOM05D005683 ORTHO05D006958 9.8e-77 290.8 232 59.5
Gohir.A05G166700 Gossypium hirsutum HOM05D005683 ORTHO05D006958 1.3e-76 290.4 229 63.8
Gohir.D05G169700 Gossypium hirsutum HOM05D005683 ORTHO05D006958 1.3e-76 290.4 229 63.8
Ciclev10016376m.g Citrus clementina HOM05D005683 ORTHO05D006958 2.8e-76 289.3 216 63.0
MD05G1328900 Malus domestica HOM05D005683 ORTHO05D006958 3.7e-76 288.9 226 62.4
Lj2A278T71 Lonicera japonica HOM05D005683 ORTHO05D006958 4.8e-76 288.5 217 60.8
Lalb_Chr05g0218101 Lupinus albus HOM05D005683 ORTHO05D006958 4.8e-76 288.5 226 58.4
PGR042G1297 Punica granatum HOM05D005683 ORTHO05D006958 4.8e-76 288.5 232 59.5
TAR627G0612 Trochodendron aralioides HOM05D005683 ORTHO05D006958 4.8e-76 288.5 238 59.7
MELO3C007336.2 Cucumis melo HOM05D005683 ORTHO05D006958 6.3e-76 288.1 225 60.0
Gorai.009G174900 Gossypium raimondii HOM05D005683 ORTHO05D006958 8.3e-76 287.7 229 63.3
MD10G1305800 Malus domestica HOM05D005683 ORTHO05D006958 8.3e-76 287.7 226 61.9
TWI38G0326 Tripterygium wilfordii HOM05D005683 ORTHO05D006958 8.3e-76 287.7 236 58.1
ClCG01G022390 Citrullus lanatus HOM05D005683 ORTHO05D006958 3.1e-75 285.8 234 59.0
SGA_v2.0_scaffold114G31992 Striga asiatica HOM05D005683 ORTHO05D006958 3.1e-75 285.8 235 61.3
Potri.011G040100 Populus trichocarpa HOM05D005683 ORTHO05D006958 9.1e-75 284.3 230 59.1
Sc17g0006760 Simmondsia chinensis HOM05D005683 ORTHO05D006958 1.2e-74 283.9 217 61.8
Cpa.g.sc27.157 Carica papaya HOM05D005683 ORTHO05D006958 1.6e-74 283.5 232 60.8
CsaV3_6G049570 Cucumis sativus L. HOM05D005683 ORTHO05D006958 3.5e-74 282.3 245 56.7
FvH4_3g03670 Fragaria vesca HOM05D005683 ORTHO05D006958 4.5e-74 282.0 227 59.5
FAN11G3671 Fragaria x ananassa HOM05D005683 ORTHO05D006958 4.5e-74 282.0 227 59.5
FAN16G0586 Fragaria x ananassa HOM05D005683 ORTHO05D006958 4.5e-74 282.0 227 59.5
arahy.Tifrunner.gnm1.ann1.1EQ2T2 Arachis hypogaea HOM05D005683 ORTHO05D006958 5.9e-74 281.6 244 55.7
Prupe.4G033900 Prunus persica HOM05D005683 ORTHO05D006958 5.9e-74 281.6 227 60.4
Hund23579 Selenicereus undatus HOM05D005683 ORTHO05D006958 1.0e-73 280.8 240 57.5
arahy.Tifrunner.gnm1.ann1.YX67LP Arachis hypogaea HOM05D005683 ORTHO05D006958 1.3e-73 280.4 244 55.3
Lj6g0011505 Lotus japonicus HOM05D005683 ORTHO05D006958 2.9e-73 279.3 223 56.1
Sed0027497 Sechium edule HOM05D005683 ORTHO05D006958 5.0e-73 278.5 212 61.3
Ah.09g236340 Amaranthus hybridus HOM05D005683 ORTHO05D006958 6.5e-73 278.1 232 56.5
Gohir.A10G019100 Gossypium hirsutum HOM05D005683 ORTHO05D006958 8.5e-73 277.7 212 63.7
HanXRQChr15g0482541 Helianthus annuus HOM05D005683 ORTHO05D006958 8.5e-73 277.7 223 60.1
MBI02_g38754_MAGBIO Magnolia biondii HOM05D005683 ORTHO05D006958 2.5e-72 276.2 242 57.0
CiPaw.09G156400 Carya illinoinensis HOM05D005683 ORTHO05D006958 3.2e-72 275.8 225 60.4
FAN21G2210 Fragaria x ananassa HOM05D005683 ORTHO05D006958 3.2e-72 275.8 227 59.0
VMungo0251G1023 Vigna mungo HOM05D005683 ORTHO05D006958 4.2e-72 275.4 218 56.9
Lsat_1_v5_gn_7_20320 Lactuca sativa HOM05D005683 ORTHO05D006958 5.5e-72 275.0 247 55.1
FAN25G1197 Fragaria x ananassa HOM05D005683 ORTHO05D006958 9.4e-72 274.2 227 59.0
Cc02_g12200 Coffea canephora HOM05D005683 ORTHO05D006958 1.6e-71 273.5 223 58.3
Gorai.011G021200 Gossypium raimondii HOM05D005683 ORTHO05D006958 2.7e-71 272.7 212 62.7
Gohir.D10G020000 Gossypium hirsutum HOM05D005683 ORTHO05D006958 4.7e-71 271.9 212 62.3
Medtr4g091550 Medicago truncatula HOM05D005683 ORTHO05D006958 4.7e-71 271.9 216 58.3
Nn1g03823 Nelumbo nucifera HOM05D005683 ORTHO05D006958 4.7e-71 271.9 249 55.8
Phvul.002G220600 Phaseolus vulgaris HOM05D005683 ORTHO05D006958 4.7e-71 271.9 224 56.7
Sopen02g024190 Solanum pennellii HOM05D005683 ORTHO05D006958 6.1e-71 271.6 215 60.5
Oeu021580.1 Olea europaea HOM05D005683 ORTHO05D006958 1.0e-70 270.8 221 56.1
Solyc02g079390.4 Solanum lycopersicum HOM05D005683 ORTHO05D006958 1.0e-70 270.8 215 60.0
PGSC0003DMG400022348 Solanum tuberosum HOM05D005683 ORTHO05D006958 1.4e-70 270.4 230 58.3
Glyma.13G247700 Glycine max HOM05D005683 ORTHO05D006958 1.8e-70 270.0 220 57.7
Lj1A1216T22 Lonicera japonica HOM05D005683 ORTHO05D006958 2.3e-70 269.6 213 60.1
Nitab4.5_0000649g0210 Nicotiana tabacum HOM05D005683 ORTHO05D006958 3.0e-70 269.2 229 59.8
TPR.G15376 Trifolium pratense HOM05D005683 ORTHO05D006958 3.0e-70 269.2 217 58.5
CANSAT56G4448 Cannabis sativa HOM05D005683 ORTHO05D006958 4.0e-70 268.9 231 56.7
Hund21293 Selenicereus undatus HOM05D005683 ORTHO05D006958 5.2e-70 268.5 243 53.9
Potri.004G026700 Populus trichocarpa HOM05D005683 ORTHO05D006958 2.0e-69 266.5 226 56.6
PSO541G3127 Papaver somniferum HOM05D005683 ORTHO05D006958 4.4e-69 265.4 242 52.5
Medtr2g011490 Medicago truncatula HOM05D005683 ORTHO05D006958 9.8e-69 264.2 245 53.9
PSO675G7592 Papaver somniferum HOM05D005683 ORTHO05D006958 1.7e-68 263.5 245 52.2
Thecc.06G202400 Theobroma cacao HOM05D005683 ORTHO05D006958 1.7e-68 263.5 247 55.1
Actinidia11820 Actinidia chinensis HOM05D003506 ORTHO05D006958 2.2e-68 263.1 174 66.7
DCAR_004160 Daucus carota HOM05D005683 ORTHO05D006958 2.8e-68 262.7 229 55.9
Phvul.006G193600 Phaseolus vulgaris HOM05D005683 ORTHO05D006958 3.7e-68 262.3 227 56.8
TPR.G36735 Trifolium pratense HOM05D005683 ORTHO05D006958 3.7e-68 262.3 218 57.3
Ca_18471_v3 Cicer arietinum L. HOM05D005683 ORTHO05D006958 4.9e-68 261.9 217 58.1
MSTRG.7277 Avicennia marina HOM05D005683 ORTHO05D006958 8.3e-68 261.2 233 55.4
RcHm_v2.0_Chr5g0005711 Rosa chinensis HOM05D005683 ORTHO05D006958 8.3e-68 261.2 241 55.2
VMungo0540G1177 Vigna mungo HOM05D005683 ORTHO05D006958 8.3e-68 261.2 242 54.1
vmacro15855 Vaccinium macrocarpon HOM05D005683 ORTHO05D006958 1.1e-67 260.8 298 46.0
Lalb_Chr18g0060021 Lupinus albus HOM05D005683 ORTHO05D006958 1.8e-67 260.0 232 54.3
Peaxi162Scf01035g00114 Petunia axillaris HOM05D005683 ORTHO05D006958 3.1e-67 259.2 236 55.9
Ca_00226_v3 Cicer arietinum L. HOM05D005683 ORTHO05D006958 4.1e-67 258.8 222 56.3
Glyma.15G066100 Glycine max HOM05D005683 ORTHO05D006958 9.2e-67 257.7 225 53.8
Nitab4.5_0005620g0030 Nicotiana tabacum HOM05D005683 ORTHO05D006958 7.7e-66 254.6 251 54.2
Migut.H01529 Erythranthe guttata HOM05D005683 ORTHO05D006958 1.0e-65 254.2 216 56.9
ECA236G4035 Erigeron canadensis HOM05D005683 ORTHO05D006958 1.5e-64 250.4 246 51.6
Sp1g10010 Schrenkiella parvula HOM05D005683 ORTHO05D006958 1.5e-64 250.4 249 56.6
Lj4g0024466 Lotus japonicus HOM05D005683 ORTHO05D006958 4.7e-63 245.4 217 54.4
CAN.G424.37 Capsicum annuum HOM05D005683 ORTHO05D006958 6.1e-63 245.0 202 59.4
MBI02_g46153_MAGBIO Magnolia biondii HOM05D005683 ORTHO05D006958 8.0e-63 244.6 242 52.5
Lalb_Chr09g0327231 Lupinus albus HOM05D005683 ORTHO05D006958 1.8e-62 243.4 188 58.0
arahy.Tifrunner.gnm1.ann1.NC80VA Arachis hypogaea HOM05D005683 ORTHO05D006958 2.6e-61 239.6 221 52.5
Glyma.07G188900 Glycine max HOM05D005683 ORTHO05D006958 1.7e-60 236.9 225 50.2
Migut.M01228 Erythranthe guttata HOM05D005683 ORTHO05D006958 2.2e-60 236.5 204 54.4
unitig_748.g7566 Utricularia gibba HOM05D005683 ORTHO05D006958 6.4e-60 235.0 232 52.2
arahy.Tifrunner.gnm1.ann1.B3SD72 Arachis hypogaea HOM05D005683 ORTHO05D006958 1.1e-59 234.2 221 52.5
Zm00001eb323790 Zea mays HOM05D005683 ORTHO05D006958 1.2e-58 230.7 242 47.1
HPP92_000912 Vanilla planifolia HOM05D005683 ORTHO05D006958 3.3e-56 222.6 212 50.5
EL10Ac8g19981 Beta vulgaris HOM05D005683 ORTHO05D006958 2.0e-53 213.4 244 46.3
Duzib235G0662 Durio zibethinus HOM05D005683 ORTHO05D006958 3.2e-51 206.1 250 47.6
CDE02G0678 Ceratophyllum demersum HOM05D005683 ORTHO05D006958 9.2e-51 204.5 207 48.8
ATR1132G083 Amborella trichopoda HOM05D005683 ORTHO05D006958 2.7e-50 203.0 145 59.3
Duzib192G0920 Durio zibethinus HOM05D005683 ORTHO05D006958 4.3e-48 195.7 217 47.9
AUR62014686 Chenopodium quinoa HOM05D005683 ORTHO05D006958 4.0e-46 189.1 196 46.9
TAR629G2478 Trochodendron aralioides HOM05D005683 ORTHO05D006958 8.6e-41 171.4 149 57.0
Glyma.08G060400 Glycine max HOM05D005683 ORTHO05D006958 1.5e-40 170.6 143 53.1
Psat1g209480 Pisum sativum HOM05D005683 ORTHO05D006958 4.4e-37 159.1 129 56.6
CSS0013005 Camellia sinensis var. sinensis HOM05D005683 ORTHO05D006958 7.6e-37 158.3 145 56.6
CSS0013141 Camellia sinensis var. sinensis HOM05D005683 ORTHO05D006958 2.7e-34 149.8 168 48.2
Pp3c18_19760 Physcomitrium patens HOM05D005683 ORTHO05D006958 7.8e-34 148.3 172 44.2
Pp3c21_1800 Physcomitrium patens HOM05D005683 ORTHO05D006958 6.6e-33 145.2 169 44.4
Sp2g25370 Schrenkiella parvula HOM05D005683 ORTHO05D006958 2.6e-29 133.3 80 88.8
CDE05G0673 Ceratophyllum demersum HOM05D005683 ORTHO05D006958 1.3e-28 131.0 141 44.7
SGA_v2.0_scaffold42G16089 Striga asiatica HOM05D005683 ORTHO05D006958 9.0e-22 108.2 147 41.5
Prupe.5G244100 Prunus persica HOM05D005683 ORTHO05D006958 1.1e-19 101.3 80 53.8
BcaB05g23633 Brassica carinata HOM05D001086 ORTHO05D001112 3.6e-15 86.3 92 54.3
CBR_g51429 Chara braunii HOM05D005683 ORTHO05D006958 3.1e-14 83.2 170 32.9
Psat1g209520 Pisum sativum HOM05D005683 ORTHO05D006958 5.3e-14 82.4 76 57.9
Mapoly0084s0076 Marchantia polymorpha HOM05D002715 ORTHO05D002996 1.4e-11 74.3 148 31.8
CBR_g50374 Chara braunii HOM05D005683 ORTHO05D006958 1.9e-11 73.9 171 32.2
CiPaw.09G216800 Carya illinoinensis HOM05D002715 ORTHO05D002996 2.3e-09 67.0 138 31.2
HanXRQChr09g0252171 Helianthus annuus HOM05D002715 ORTHO05D002996 3.9e-09 66.2 145 33.1
HanXRQChr07g0203561 Helianthus annuus HOM05D002715 ORTHO05D002996 6.7e-09 65.5 175 27.4
Os01g0825900 Oryza sativa ssp. japonica HOM05D002715 ORTHO05D002996 1.1e-08 64.7 145 30.3
Lsat_1_v5_gn_2_125901 Lactuca sativa HOM05D002715 ORTHO05D002996 1.9e-08 63.9 140 30.7
QL07p033551 Quercus lobata HOM05D002715 ORTHO05D002996 1.9e-08 63.9 139 30.9
CSS0030399 Camellia sinensis var. sinensis HOM05D002715 ORTHO05D002996 3.3e-08 63.2 139 29.5
Eucgr.G02147 Eucalyptus grandis HOM05D000414 ORTHO05D000276 3.3e-08 63.2 138 28.3
DCAR_028897 Daucus carota HOM05D002715 ORTHO05D002996 5.6e-08 62.4 138 31.2
Eucgr.G02142 Eucalyptus grandis HOM05D000414 ORTHO05D000276 5.6e-08 62.4 138 28.3
SMO230G0095 Selaginella moellendorffii HOM05D002715 ORTHO05D002996 7.4e-08 62.0 140 30.0
Glyma.11G234400 Glycine max HOM05D002715 ORTHO05D002996 9.6e-08 61.6 132 31.8
Sabra16G0129000 Salix brachista HOM05D002715 ORTHO05D002996 1.3e-07 61.2 139 28.8
arahy.Tifrunner.gnm1.ann1.4CZE72 Arachis hypogaea HOM05D002715 ORTHO05D002996 2.1e-07 60.5 132 31.1
arahy.Tifrunner.gnm1.ann1.SMM8KX Arachis hypogaea HOM05D002715 ORTHO05D002996 2.1e-07 60.5 132 31.1
HPP92_007995 Vanilla planifolia HOM05D000414 ORTHO05D000276 6.2e-07 58.9 126 27.0
VMungo0331G1720 Vigna mungo HOM05D002715 ORTHO05D002996 6.2e-07 58.9 140 27.1
Phvul.008G219400 Phaseolus vulgaris HOM05D002715 ORTHO05D002996 8.1e-07 58.5 132 31.1
Potri.016G129700 Populus trichocarpa HOM05D002715 ORTHO05D002996 8.1e-07 58.5 138 29.0
HPP92_012010 Vanilla planifolia HOM05D002715 ORTHO05D002996 8.1e-07 58.5 144 29.2
Zm00001eb351970 Zea mays HOM05D002715 ORTHO05D002996 8.1e-07 58.5 145 29.7
VMungo1383G2327 Vigna mungo HOM05D002715 ORTHO05D002996 1.1e-06 58.2 132 31.1
Glyma.18G022600 Glycine max HOM05D002715 ORTHO05D002996 1.8e-06 57.4 132 31.1
SEGI_20323 Sequoiadendron giganteum HOM05D002715 ORTHO05D002996 1.8e-06 57.4 140 28.6
vmacro08919 Vaccinium macrocarpon HOM05D002715 ORTHO05D002996 1.8e-06 57.4 142 30.3
VMungo0647G0735 Vigna mungo HOM05D002715 ORTHO05D002996 1.8e-06 57.4 132 30.3
GSVIVG01031754001 Vitis vinifera HOM05D000414 ORTHO05D000276 1.8e-06 57.4 150 26.0
Phvul.001G247800 Phaseolus vulgaris HOM05D002715 ORTHO05D002996 3.1e-06 56.6 132 31.8
Sabra11G0136400 Salix brachista HOM05D000414 ORTHO05D000276 4.0e-06 56.2 127 26.0
Sabra11G0148900 Salix brachista HOM05D000414 ORTHO05D000276 4.0e-06 56.2 127 26.0
Aa31LG10G2700 Aethionema arabicum HOM05D000414 ORTHO05D000276 6.9e-06 55.5 139 28.8
MD06G1213000 Malus domestica HOM05D000414 ORTHO05D000276 6.9e-06 55.5 135 24.4
Prupe.5G219500 Prunus persica HOM05D000414 ORTHO05D000276 6.9e-06 55.5 143 25.2
Sed0007955 Sechium edule HOM05D000212 ORTHO05D002824 6.9e-06 55.5 134 26.1


User provided reference genes

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