Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24880 Brassica carinata HOM05D037585 ORTHO05D032504 8.1e-28 126.3 63 100.0
BolC5t29615H Brassica oleracea HOM05D037585 ORTHO05D032504 5.3e-11 70.5 42 85.7
AT5G18670 Arabidopsis thaliana HOM05D000404 ORTHO05D005791 9.1e-11 69.7 49 75.5
Thhalv10013215m.g Eutrema salsugineum HOM05D000404 ORTHO05D005791 2.0e-10 68.6 52 69.2
C05p08640 Brassica napus HOM05D037585 ORTHO05D032504 5.9e-10 67.0 33 97.0
Sp6g25670 Schrenkiella parvula HOM05D000404 ORTHO05D005791 7.7e-10 66.6 41 80.5
A10p20890 Brassica napus HOM05D000404 ORTHO05D005791 8.5e-09 63.2 61 63.9
BraA10t44154Z Brassica rapa HOM05D000404 ORTHO05D005791 8.5e-09 63.2 61 63.9
AL6G29950 Arabidopsis lyrata HOM05D000404 ORTHO05D005791 1.1e-08 62.8 60 65.0
CARHR194330 Cardamine hirsuta HOM05D000404 ORTHO05D005791 1.1e-08 62.8 49 67.3
BcaC07g40101 Brassica carinata HOM05D000404 ORTHO05D005791 3.2e-08 61.2 50 66.0
BolC9t58648H Brassica oleracea HOM05D000404 ORTHO05D005791 9.4e-08 59.7 51 70.6
BcaC04g18656 Brassica carinata HOM05D000404 ORTHO05D005791 1.6e-07 58.9 62 62.9
C09p57790 Brassica napus HOM05D000404 ORTHO05D005791 2.1e-07 58.5 62 62.9
Aa31LG11G10950 Aethionema arabicum HOM05D000404 ORTHO05D005791 2.7e-07 58.2 49 69.4
A03p09020 Brassica napus HOM05D000404 ORTHO05D005791 4.6e-07 57.4 55 65.5
THA.LOC104827120 Tarenaya hassleriana HOM05D000404 ORTHO05D005791 6.1e-07 57.0 41 70.7
BcaB01g05257 Brassica carinata HOM05D000404 ORTHO05D005791 2.3e-06 55.1 55 63.6
C03p10500 Brassica napus HOM05D000404 ORTHO05D005791 2.3e-06 55.1 55 63.6
BolC3t13532H Brassica oleracea HOM05D000404 ORTHO05D005791 2.3e-06 55.1 55 63.6


User provided reference genes

Program Settings