Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 6.3e-82 307.4 153 100.0
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 1.1e-70 270.0 130 100.0
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 1.4e-70 269.6 130 99.2
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 4.2e-70 268.1 130 99.2
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 4.2e-70 268.1 130 99.2
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 3.6e-69 265.0 130 96.9
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 1.4e-68 263.1 130 96.2
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 1.8e-68 262.7 133 97.0
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 1.5e-67 259.6 130 96.9
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 3.3e-67 258.5 132 94.7
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 4.4e-67 258.1 130 94.6
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 4.4e-67 258.1 130 94.6
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 1.7e-66 256.1 130 96.2
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 1.8e-65 252.7 130 93.8
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 5.3e-65 251.1 127 95.3
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 7.0e-65 250.8 165 78.2
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 1.6e-64 249.6 131 92.4
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 1.8e-57 226.1 124 86.3
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 1.8e-57 226.1 130 83.1
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 4.1e-57 224.9 130 82.3
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 1.2e-56 223.4 130 81.5
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 1.2e-56 223.4 130 81.5
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 2.0e-56 222.6 130 81.5
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 2.7e-56 222.2 127 81.9
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 2.7e-56 222.2 130 80.8
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 3.5e-56 221.9 128 82.0
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 3.5e-56 221.9 127 82.7
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 3.5e-56 221.9 127 81.1
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 3.5e-56 221.9 121 86.8
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 3.5e-56 221.9 130 80.8
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 5.9e-56 221.1 137 75.9
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 7.7e-56 220.7 130 80.8
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 7.7e-56 220.7 127 81.9
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 1.0e-55 220.3 130 79.2
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 1.3e-55 219.9 128 81.2
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 2.9e-55 218.8 130 79.2
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.9e-55 218.8 128 81.2
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 2.9e-55 218.8 130 79.2
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 2.9e-55 218.8 127 81.1
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 3.8e-55 218.4 120 85.8
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 3.8e-55 218.4 130 79.2
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 5.0e-55 218.0 128 79.7
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 8.5e-55 217.2 120 85.0
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 8.5e-55 217.2 130 78.5
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 8.5e-55 217.2 132 78.0
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 1.1e-54 216.9 129 79.1
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 1.5e-54 216.5 122 83.6
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 1.5e-54 216.5 120 84.2
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 1.9e-54 216.1 130 78.5
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 2.5e-54 215.7 130 80.0
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 2.5e-54 215.7 130 76.9
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 3.2e-54 215.3 127 78.0
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 4.2e-54 214.9 128 81.2
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 4.2e-54 214.9 130 79.2
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 5.5e-54 214.5 130 78.5
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 5.5e-54 214.5 128 78.9
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 7.2e-54 214.2 130 77.7
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 9.4e-54 213.8 130 76.9
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 9.4e-54 213.8 127 79.5
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.2e-53 213.4 130 77.7
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.6e-53 213.0 130 76.9
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 1.6e-53 213.0 127 78.0
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 2.7e-53 212.2 127 77.2
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 3.6e-53 211.8 120 81.7
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 3.6e-53 211.8 128 78.1
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 4.7e-53 211.5 128 77.3
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 4.7e-53 211.5 119 83.2
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 4.7e-53 211.5 133 75.2
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 6.1e-53 211.1 121 81.8
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 8.0e-53 210.7 129 75.2
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.0e-52 210.3 126 79.4
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 1.0e-52 210.3 130 75.4
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 1.8e-52 209.5 129 76.7
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 4.0e-52 208.4 120 79.2
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 4.0e-52 208.4 120 81.7
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 4.0e-52 208.4 129 74.4
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 5.2e-52 208.0 133 74.4
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 6.8e-52 207.6 127 75.6
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 3.4e-51 205.3 127 75.6
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 4.4e-51 204.9 124 78.2
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 5.7e-51 204.5 119 81.5
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 7.5e-51 204.1 129 76.0
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 9.8e-51 203.8 107 93.5
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 9.8e-51 203.8 140 72.1
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 2.2e-50 202.6 127 74.8
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 3.7e-50 201.8 127 74.0
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 1.1e-49 200.3 127 74.0
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 1.4e-49 199.9 127 73.2
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 1.4e-49 199.9 127 73.2
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 2.4e-49 199.1 127 72.4
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 4.1e-49 198.4 130 75.4
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 7.0e-49 197.6 166 61.4
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 7.0e-49 197.6 111 83.8
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 3.5e-48 195.3 108 85.2
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 4.5e-48 194.9 115 81.7
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 7.7e-48 194.1 111 83.8
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.3e-47 193.4 108 84.3
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 1.3e-47 193.4 123 74.8
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 1.7e-47 193.0 107 85.0
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 5.0e-47 191.4 112 82.1
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 6.5e-47 191.0 112 82.1
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 8.5e-47 190.7 108 83.3
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.9e-46 189.5 119 75.6
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 1.6e-45 186.4 107 82.2
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 8.0e-45 184.1 108 80.6
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 1.2e-43 180.3 123 67.5
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 2.0e-43 179.5 109 79.8
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 6.3e-42 174.5 115 72.2
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 3.1e-41 172.2 92 89.1
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 2.0e-40 169.5 99 81.8
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 1.3e-39 166.8 110 69.1
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 3.6e-37 158.7 92 80.4
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 3.7e-34 148.7 115 60.0
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 9.2e-33 144.1 126 57.9
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 9.2e-33 144.1 126 57.9
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 5.9e-32 141.4 124 56.5
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 5.9e-32 141.4 124 55.6
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 9.5e-30 134.0 128 51.6
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 4.4e-27 125.2 112 55.4
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 3.9e-23 112.1 75 70.7
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 1.1e-22 110.5 85 60.0
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 1.5e-22 110.2 121 43.0
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 2.1e-21 106.3 120 40.0


User provided reference genes

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