Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 3.6e-70 268.1 130 100.0
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 3.6e-70 268.1 130 100.0
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 8.0e-70 266.9 130 99.2
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 8.0e-70 266.9 130 99.2
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 1.0e-69 266.5 130 98.5
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 8.8e-69 263.5 130 96.9
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 1.5e-68 262.7 133 97.7
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 9.7e-68 260.0 130 95.4
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 8.3e-67 256.9 132 94.7
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 1.1e-66 256.5 130 94.6
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 1.1e-66 256.5 130 94.6
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 1.1e-66 256.5 130 96.2
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 1.2e-65 253.1 130 95.4
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 1.3e-64 249.6 130 93.1
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 3.8e-64 248.1 127 94.5
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 3.8e-64 248.1 131 92.4
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 5.0e-64 247.7 165 77.6
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 1.3e-56 223.0 130 82.3
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 2.9e-56 221.9 130 81.5
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 8.6e-56 220.3 130 80.8
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 8.6e-56 220.3 130 80.8
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 1.5e-55 219.5 130 80.8
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 1.5e-55 219.5 130 80.8
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 1.9e-55 219.2 127 81.1
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 1.9e-55 219.2 130 80.0
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.5e-55 218.8 127 81.9
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.5e-55 218.8 127 80.3
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 2.5e-55 218.8 130 80.0
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 3.3e-55 218.4 120 86.7
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 3.3e-55 218.4 128 81.2
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 4.2e-55 218.0 120 86.7
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 5.5e-55 217.6 127 81.1
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 7.2e-55 217.2 130 78.5
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 1.2e-54 216.5 128 80.5
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 2.1e-54 215.7 130 78.5
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 2.1e-54 215.7 130 78.5
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 2.1e-54 215.7 127 80.3
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 2.8e-54 215.3 120 85.0
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.8e-54 215.3 128 80.5
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 2.8e-54 215.3 130 78.5
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 6.1e-54 214.2 120 84.2
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 6.1e-54 214.2 130 77.7
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 8.0e-54 213.8 129 78.3
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 8.0e-54 213.8 130 79.2
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 1.0e-53 213.4 122 82.8
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 1.0e-53 213.4 120 83.3
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 1.0e-53 213.4 123 81.3
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 1.4e-53 213.0 130 77.7
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 1.4e-53 213.0 122 82.8
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 1.8e-53 212.6 130 79.2
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 1.8e-53 212.6 130 76.2
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 2.3e-53 212.2 127 77.2
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 4.0e-53 211.5 130 77.7
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 4.0e-53 211.5 128 80.5
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 4.0e-53 211.5 128 77.3
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 5.2e-53 211.1 128 78.1
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 5.2e-53 211.1 130 76.9
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 6.8e-53 210.7 130 76.2
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 6.8e-53 210.7 127 78.7
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 8.9e-53 210.3 130 76.9
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.2e-52 209.9 130 76.2
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 1.2e-52 209.9 127 77.2
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 2.0e-52 209.1 127 76.4
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 2.6e-52 208.8 120 80.8
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 3.4e-52 208.4 119 82.4
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 3.4e-52 208.4 128 77.3
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 4.4e-52 208.0 128 76.6
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 5.7e-52 207.6 129 74.4
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 7.5e-52 207.2 126 78.6
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 1.3e-51 206.5 129 76.0
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.7e-51 206.1 128 76.6
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 1.7e-51 206.1 120 80.8
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 2.2e-51 205.7 129 74.4
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 2.8e-51 205.3 120 78.3
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 2.8e-51 205.3 120 80.8
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 2.8e-51 205.3 129 73.6
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 4.9e-51 204.5 127 74.8
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 1.8e-50 202.6 107 93.5
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.8e-50 202.6 128 75.8
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 2.4e-50 202.2 127 74.8
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 3.1e-50 201.8 119 80.7
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 3.1e-50 201.8 124 77.4
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 5.4e-50 201.1 129 75.2
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 7.0e-50 200.7 140 71.4
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 1.6e-49 199.5 127 74.0
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 2.7e-49 198.7 127 73.2
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 5.9e-49 197.6 130 75.4
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 7.8e-49 197.2 127 73.2
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 1.0e-48 196.8 111 83.8
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 1.0e-48 196.8 127 72.4
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 1.0e-48 196.8 127 72.4
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 1.7e-48 196.1 127 71.7
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 5.0e-48 194.5 166 60.8
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 5.0e-48 194.5 108 85.2
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 6.6e-48 194.1 115 81.7
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 1.1e-47 193.4 111 83.8
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.9e-47 192.6 108 84.3
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 3.3e-47 191.8 107 85.0
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 7.3e-47 190.7 112 82.1
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 9.5e-47 190.3 123 74.0
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 9.5e-47 190.3 112 82.1
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 1.2e-46 189.9 108 83.3
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 4.7e-46 188.0 113 78.8
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 3.1e-45 185.3 107 82.2
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 1.2e-44 183.3 108 80.6
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 1.7e-43 179.5 123 67.5
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 3.7e-43 178.3 109 79.8
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 9.2e-42 173.7 115 72.2
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 1.7e-40 169.5 92 88.0
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 2.3e-40 169.1 99 81.8
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 1.9e-39 166.0 110 69.1
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 4.0e-37 158.3 92 80.4
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 5.4e-34 147.9 115 60.0
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 1.2e-30 136.7 120 57.5
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 1.2e-30 136.7 120 57.5
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 2.8e-30 135.6 120 55.8
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 2.8e-30 135.6 120 55.0
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 5.8e-28 127.9 118 52.5
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 4.1e-26 121.7 108 55.6
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 3.3e-23 112.1 75 70.7
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 4.7e-22 108.2 120 43.3
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 4.7e-22 108.2 85 58.8
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 1.8e-21 106.3 120 40.8


User provided reference genes

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