Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24800 Brassica carinata HOM05D011270 ORTHO05D012905 1.1e-92 343.2 166 100.0
C05p08330 Brassica napus HOM05D011270 ORTHO05D012905 1.2e-62 243.4 127 89.8
A06p06850 Brassica napus HOM05D011270 ORTHO05D012905 7.8e-62 240.7 127 89.0
BolC5t29583H Brassica oleracea HOM05D011270 ORTHO05D012905 7.8e-62 240.7 127 88.2
BraA06t23899Z Brassica rapa HOM05D011270 ORTHO05D012905 7.8e-62 240.7 127 89.0
BcaC07g38545 Brassica carinata HOM05D011270 ORTHO05D012905 7.8e-54 214.2 132 80.3
BolC8t48985H Brassica oleracea HOM05D011270 ORTHO05D012905 7.8e-54 214.2 132 80.3
BcaC07g38553 Brassica carinata HOM05D011270 ORTHO05D012905 1.1e-52 210.3 132 78.0
C08p13500 Brassica napus HOM05D011270 ORTHO05D012905 1.5e-52 209.9 132 79.5
BraA08t35324Z Brassica rapa HOM05D011270 ORTHO05D012905 3.3e-52 208.8 132 78.0
BcaC07g38551 Brassica carinata HOM05D011270 ORTHO05D012905 4.3e-52 208.4 132 78.0
A08p34120 Brassica napus HOM05D011270 ORTHO05D012905 7.3e-52 207.6 132 78.8
BolC8t48976H Brassica oleracea HOM05D011270 ORTHO05D012905 6.2e-51 204.5 132 77.3
Sp1g08810 Schrenkiella parvula HOM05D001270 ORTHO05D001099 4.4e-49 198.4 132 78.8
CARHR010290 Cardamine hirsuta HOM05D011270 ORTHO05D012905 8.4e-48 194.1 131 74.8
Carub.0001s0960 Capsella rubella HOM05D011270 ORTHO05D012905 2.5e-44 182.6 132 68.9
C08p13460 Brassica napus HOM05D011270 ORTHO05D012905 2.6e-25 119.4 68 77.9
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.1e-10 70.9 90 45.6
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 5.9e-09 65.1 91 39.6
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 5.9e-09 65.1 90 38.9
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 7.7e-09 64.7 92 43.5
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 1.0e-08 64.3 127 33.1
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.0e-08 64.3 90 40.0
Phvul.001G030900 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 2.9e-08 62.8 104 34.6
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 3.8e-08 62.4 93 38.7
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 6.5e-08 61.6 117 37.6
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 8.5e-08 61.2 149 34.2
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 8.5e-08 61.2 129 34.9
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 8.5e-08 61.2 98 38.8
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.4e-07 60.5 99 39.4
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 1.4e-07 60.5 123 33.3
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 2.5e-07 59.7 107 36.4
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 3.2e-07 59.3 94 38.3
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.5e-07 58.5 129 33.3
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.5e-07 58.5 131 36.6
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 5.5e-07 58.5 109 37.6
VMungo0647G0350 Vigna mungo HOM05D014755 ORTHO05D005146 5.5e-07 58.5 105 32.4
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 7.2e-07 58.2 94 38.3
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 7.2e-07 58.2 88 39.8
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 9.4e-07 57.8 95 40.0
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 9.4e-07 57.8 116 37.9
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.6e-06 57.0 96 39.6
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.6e-06 57.0 95 38.9
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 2.1e-06 56.6 90 36.7
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 3.6e-06 55.8 101 39.6
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.6e-06 55.8 96 39.6
Phvul.009G074100 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 3.6e-06 55.8 89 31.5
TPR.G13134 Trifolium pratense HOM05D014755 ORTHO05D005146 3.6e-06 55.8 92 37.0
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 6.1e-06 55.1 90 37.8
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 7.9e-06 54.7 96 39.6


User provided reference genes

Program Settings