Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24746 Brassica carinata HOM05D003118 ORTHO05D032428 2.2e-160 568.9 294 100.0
BolC5t29453H Brassica oleracea HOM05D003118 ORTHO05D032428 1.1e-79 300.8 317 57.7
C05p06960 Brassica napus HOM05D003118 ORTHO05D032428 2.3e-77 293.1 311 57.6
BraA06t23787Z Brassica rapa HOM05D003118 ORTHO05D003618 9.9e-68 261.2 365 47.9
A06p05760 Brassica napus HOM05D003118 ORTHO05D003618 2.1e-65 253.4 337 49.9
BcaB07g34111 Brassica carinata HOM05D003118 ORTHO05D003618 2.6e-36 156.8 362 36.7
Thhalv10007035m.g Eutrema salsugineum HOM05D003118 ORTHO05D003618 2.9e-27 126.7 144 54.2
Carub.0001s0824 Capsella rubella HOM05D003118 ORTHO05D003618 4.2e-26 122.9 116 61.2
C09p22820 Brassica napus HOM05D003118 ORTHO05D101899 2.3e-24 117.1 172 48.3
AT1G08910 Arabidopsis thaliana HOM05D003118 ORTHO05D003618 3.0e-24 116.7 116 58.6
AL1G19340 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 4.4e-23 112.8 116 56.0
BraA08t35403Z Brassica rapa HOM05D003118 ORTHO05D003618 1.8e-21 107.5 119 53.8
Sp1g07530 Schrenkiella parvula HOM05D003118 ORTHO05D003618 2.4e-21 107.1 154 46.1
BraA09t41913Z Brassica rapa HOM05D003118 ORTHO05D003618 2.2e-19 100.5 146 43.8
CARHR008810 Cardamine hirsuta HOM05D003118 ORTHO05D003618 2.2e-19 100.5 104 57.7
C08p49770 Brassica napus HOM05D003118 ORTHO05D003618 1.9e-18 97.4 133 45.9
C08p12330 Brassica napus HOM05D003118 ORTHO05D003618 4.2e-18 96.3 381 29.4
BolC8t48874H Brassica oleracea HOM05D003118 ORTHO05D003618 4.2e-18 96.3 381 29.4
A09p65700 Brassica napus HOM05D003118 ORTHO05D003618 1.2e-17 94.7 146 41.8
A08p34920 Brassica napus HOM05D003118 ORTHO05D003618 1.4e-16 91.3 381 28.3
BolC8t52504H Brassica oleracea HOM05D003118 ORTHO05D003618 7.4e-15 85.5 146 41.8
BcaB03g13534 Brassica carinata HOM05D003118 ORTHO05D095379 2.5e-10 70.5 59 71.2
BcaC07g41918 Brassica carinata HOM05D003118 ORTHO05D003618 5.5e-10 69.3 110 43.6
BcaB03g13535 Brassica carinata HOM05D003118 ORTHO05D003618 1.6e-09 67.8 88 45.5
Aa31sc17G150 Aethionema arabicum HOM05D003118 ORTHO05D003618 1.0e-08 65.1 143 38.5
Ciclev10024541m.g Citrus clementina HOM05D003118 ORTHO05D003618 5.7e-07 59.3 106 34.0
Thecc.03G287000 Theobroma cacao HOM05D003118 ORTHO05D003618 1.7e-06 57.8 101 34.7


User provided reference genes

Program Settings