Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24705 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-38 162.2 74 100.0
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-17 92.4 61 73.8
BcaC05g25277 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-14 80.9 61 62.3
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 4.6e-14 80.9 61 62.3
BolC2t11199H Brassica oleracea HOM05D000589 ORTHO05D001885 4.6e-14 80.9 61 62.3
BolC8t49444H Brassica oleracea HOM05D000589 ORTHO05D001885 4.6e-14 80.9 61 62.3
BcaB01g04274 Brassica carinata HOM05D002676 ORTHO05D001885 1.8e-13 79.0 61 59.0
C07p49130 Brassica napus HOM05D000589 ORTHO05D001885 3.0e-13 78.2 58 62.1
BcaC01g05715 Brassica carinata HOM05D000589 ORTHO05D001885 8.7e-13 76.6 65 53.8
BcaC08g45778 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-12 75.9 60 58.3
BolC3t21112H Brassica oleracea HOM05D000589 ORTHO05D001885 3.3e-12 74.7 62 56.5
BolC5t33392H Brassica oleracea HOM05D000589 ORTHO05D001885 4.3e-12 74.3 61 55.7
BcaC07g42449 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-12 73.9 61 59.0
BolC5t30704H Brassica oleracea HOM05D000589 ORTHO05D000401 9.6e-12 73.2 61 57.4
BraA09t40543Z Brassica rapa HOM05D000589 ORTHO05D001885 9.6e-12 73.2 58 56.9
BcaB02g11384 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-11 72.4 66 56.1
BcaB03g14716 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-11 72.4 66 56.1
BcaB04g18869 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-11 72.4 70 51.4
BolC2t12526H Brassica oleracea HOM05D000589 ORTHO05D001885 2.8e-11 71.6 62 53.2
BolC7t46298H Brassica oleracea HOM05D000589 ORTHO05D001885 2.8e-11 71.6 61 54.1
BcaC04g23550 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-11 70.1 62 54.8
BolC9t59088H Brassica oleracea HOM05D000589 ORTHO05D001885 8.1e-11 70.1 62 54.8
BolC7t43381H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-10 69.7 55 56.4
BcaC05g28515 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-10 68.9 58 53.4
BcaB04g19137 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-10 68.6 70 47.1
BcaC04g20325 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-10 68.6 63 49.2
BolC9t58427H Brassica oleracea HOM05D000589 ORTHO05D000401 3.1e-10 68.2 63 49.2
BolC2t09275H Brassica oleracea HOM05D000589 ORTHO05D001885 4.0e-10 67.8 65 50.8
BcaC08g45440 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-09 66.2 64 48.4
BolC9t54662H Brassica oleracea HOM05D000589 ORTHO05D024463 1.2e-09 66.2 66 51.5
BcaC04g22249 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-09 65.9 66 45.5
BcaC04g22408 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-09 65.9 70 42.9
BcaC03g15169 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-09 64.7 70 42.9
BolC4t24673H Brassica oleracea HOM05D000589 ORTHO05D001885 4.5e-09 64.3 52 55.8
BcaB06g28622 Brassica carinata HOM05D000888 ORTHO05D000740 5.8e-09 63.9 61 54.1
BolC6t36507H Brassica oleracea HOM05D000589 ORTHO05D001885 5.8e-09 63.9 52 53.8
BcaB03g12711 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-08 62.8 63 46.0
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 1.3e-08 62.8 58 51.7
A09p69380 Brassica napus HOM05D000696 ORTHO05D001068 2.2e-08 62.0 61 45.9
BolC8t52930H Brassica oleracea HOM05D000696 ORTHO05D001068 2.2e-08 62.0 61 45.9
BcaC03g17183 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-08 61.6 33 75.8
BcaC08g43983 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-08 61.6 48 56.2
BolC6t36567H Brassica oleracea HOM05D000589 ORTHO05D001885 2.9e-08 61.6 48 56.2
BolC1t00773H Brassica oleracea HOM05D000589 ORTHO05D001885 4.9e-08 60.8 64 45.3
BolC8t47336H Brassica oleracea HOM05D000589 ORTHO05D000401 4.9e-08 60.8 79 41.8
Carub.0006s2645 Capsella rubella HOM05D000589 ORTHO05D001885 6.5e-08 60.5 61 52.5
Carub.0007s3079 Capsella rubella HOM05D000589 ORTHO05D001885 8.4e-08 60.1 59 42.4
BcaB01g05038 Brassica carinata HOM05D000007 ORTHO05D000017 1.9e-07 58.9 61 50.8
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 1.9e-07 58.9 64 45.3
BcaC02g12212 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-07 58.5 32 71.9
BolC8t49853H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-07 58.5 50 52.0
BcaC04g21855 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-07 58.2 52 51.9
BolC7t44689H Brassica oleracea HOM05D000589 ORTHO05D001885 3.2e-07 58.2 50 50.0
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 3.2e-07 58.2 87 37.9
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 5.5e-07 57.4 68 44.1
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 5.5e-07 57.4 58 50.0
BolC3t19562H Brassica oleracea HOM05D000589 ORTHO05D001885 5.5e-07 57.4 49 55.1
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 5.5e-07 57.4 68 44.1
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 9.3e-07 56.6 79 39.2
BolC2t08273H Brassica oleracea HOM05D000589 ORTHO05D000401 9.3e-07 56.6 34 61.8
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 9.3e-07 56.6 71 42.3
BcaB05g22170 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-06 56.2 82 35.4
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-06 56.2 67 44.8
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 1.2e-06 56.2 60 46.7
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-06 55.8 64 46.9
BcaC09g51508 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-06 55.8 68 47.1
BraA02t07685Z Brassica rapa HOM05D000589 ORTHO05D001885 3.5e-06 54.7 68 41.2
BcaC04g21787 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-06 54.3 67 43.3
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 6.0e-06 53.9 68 39.7
Carub.0002s1040 Capsella rubella HOM05D000589 ORTHO05D001885 6.0e-06 53.9 59 49.2
BolC7t41896H Brassica oleracea HOM05D000589 ORTHO05D001885 7.9e-06 53.5 37 54.1
BolC7t43826H Brassica oleracea HOM05D000589 ORTHO05D001885 7.9e-06 53.5 83 39.8


User provided reference genes

Program Settings