Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24341 Brassica carinata HOM05D000862 ORTHO05D003588 4.1e-53 211.1 102 100.0
Carub.0001s0511 Capsella rubella HOM05D000862 ORTHO05D003588 5.7e-39 164.1 101 81.2
AL1G15670 Arabidopsis lyrata HOM05D000862 ORTHO05D003588 4.8e-38 161.0 101 82.2
Thhalv10008892m.g Eutrema salsugineum HOM05D000862 ORTHO05D003588 1.8e-37 159.1 101 80.2
Sp1g04570 Schrenkiella parvula HOM05D000862 ORTHO05D003588 2.0e-36 155.6 101 78.2
AT1G05760 Arabidopsis thaliana HOM05D000862 ORTHO05D003588 7.7e-36 153.7 101 77.2
C05p04090 Brassica napus HOM05D000862 ORTHO05D003588 2.5e-34 148.7 101 75.2
BolC5t29188H Brassica oleracea HOM05D000862 ORTHO05D003588 2.5e-34 148.7 101 75.2
A10p04470 Brassica napus HOM05D000862 ORTHO05D003588 3.2e-34 148.3 101 75.2
BraA10t42714Z Brassica rapa HOM05D000862 ORTHO05D003588 3.2e-34 148.3 101 75.2
BcaC05g24339 Brassica carinata HOM05D000862 ORTHO05D003588 6.1e-33 144.1 102 74.5
Aa31LG1G8610 Aethionema arabicum HOM05D000862 ORTHO05D003588 8.0e-33 143.7 96 74.0
CARHR005260 Cardamine hirsuta HOM05D000862 ORTHO05D003588 1.0e-32 143.3 98 73.5
CARHR005280 Cardamine hirsuta HOM05D000862 ORTHO05D003588 5.0e-19 97.8 99 55.6
THA.LOC104800919 Tarenaya hassleriana HOM05D000862 ORTHO05D003588 2.5e-18 95.5 94 58.5
AT1G05770 Arabidopsis thaliana HOM05D000862 ORTHO05D003588 2.1e-17 92.4 108 53.7
BolC5t29187H Brassica oleracea HOM05D000862 ORTHO05D003588 4.9e-14 81.3 41 92.7
THA.LOC104800921 Tarenaya hassleriana HOM05D008029 ORTHO05D003588 1.7e-11 72.8 94 46.8
THA.LOC104815871 Tarenaya hassleriana HOM05D000862 ORTHO05D003588 5.0e-11 71.2 93 47.3
BcaC05g24342 Brassica carinata HOM05D000862 ORTHO05D003588 1.1e-10 70.1 90 46.7
THA.LOC104801543 Tarenaya hassleriana HOM05D008029 ORTHO05D003588 4.3e-10 68.2 88 47.7
Oeu016489.1 Olea europaea HOM05D007843 ORTHO05D003639 5.6e-10 67.8 81 48.1
Oeu040720.1 Olea europaea HOM05D000862 ORTHO05D003588 7.3e-10 67.4 81 48.1
Thhalv10009313m.g Eutrema salsugineum HOM05D008029 ORTHO05D003588 1.2e-09 66.6 84 47.6
THA.LOC104800920 Tarenaya hassleriana HOM05D008029 ORTHO05D003588 1.6e-09 66.2 87 44.8
AUR62016202 Chenopodium quinoa HOM05D008029 ORTHO05D003588 6.2e-09 64.3 77 42.9
BcaC05g24340 Brassica carinata HOM05D000862 ORTHO05D003588 8.0e-09 63.9 35 82.9
Solyc09g083020.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 1.4e-08 63.2 84 39.3
vmacro08051 Vaccinium macrocarpon HOM05D000862 ORTHO05D003588 1.4e-08 63.2 82 43.9
Potri.010G144900 Populus trichocarpa HOM05D008029 ORTHO05D003588 4.0e-08 61.6 78 39.7
SGA_v2.0_scaffold480G52303 Striga asiatica HOM05D000862 ORTHO05D003588 4.0e-08 61.6 82 39.0
Migut.N00044 Erythranthe guttata HOM05D000862 ORTHO05D003588 6.8e-08 60.8 116 38.8
Sopen09g031890 Solanum pennellii HOM05D000862 ORTHO05D003588 2.6e-07 58.9 84 38.1
TAR636G2997 Trochodendron aralioides HOM05D000862 ORTHO05D003588 4.4e-07 58.2 102 37.3
CAN.G749.20 Capsicum annuum HOM05D000862 ORTHO05D003588 5.8e-07 57.8 85 38.8
HanXRQChr12g0379721 Helianthus annuus HOM05D000862 ORTHO05D003588 7.5e-07 57.4 85 40.0
Sopen09g031910 Solanum pennellii HOM05D000862 ORTHO05D003588 7.5e-07 57.4 79 36.7
C05p04080 Brassica napus HOM05D008029 ORTHO05D003588 9.8e-07 57.0 86 45.3
PGSC0003DMG400006098 Solanum tuberosum HOM05D000862 ORTHO05D003588 1.7e-06 56.2 102 34.3
MSTRG.21770 Avicennia marina HOM05D000862 ORTHO05D003588 2.2e-06 55.8 78 43.6
Nitab4.5_0001568g0080 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.9e-06 55.5 100 35.0
AUR62039285 Chenopodium quinoa HOM05D008029 ORTHO05D003588 4.9e-06 54.7 78 39.7
TAR636G1580 Trochodendron aralioides HOM05D000862 ORTHO05D003588 4.9e-06 54.7 80 37.5
CAN.G749.17 Capsicum annuum HOM05D000002 ORTHO05D003588 6.4e-06 54.3 87 34.5
Rhsim04G0235700 Rhododendron simsii HOM05D000862 ORTHO05D003588 6.4e-06 54.3 80 41.2
Rhsim04G0236000 Rhododendron simsii HOM05D000862 ORTHO05D003588 6.4e-06 54.3 83 39.8
Rhsim04G0236500 Rhododendron simsii HOM05D000862 ORTHO05D003588 6.4e-06 54.3 81 39.5
Rhsim04G0236800 Rhododendron simsii HOM05D000862 ORTHO05D003588 6.4e-06 54.3 81 38.3
PGSC0003DMG400043196 Solanum tuberosum HOM05D000862 ORTHO05D003588 8.3e-06 53.9 83 37.3


User provided reference genes

Program Settings