Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24308 Brassica carinata HOM05D008524 ORTHO05D010700 7.2e-33 143.3 70 100.0
C05p04400 Brassica napus HOM05D008524 ORTHO05D010700 7.2e-33 143.3 70 100.0
BolC5t29213H Brassica oleracea HOM05D008524 ORTHO05D010700 7.2e-33 143.3 70 100.0
BraA10t42738Z Brassica rapa HOM05D008524 ORTHO05D010700 2.1e-32 141.7 70 98.6
BcaB02g06823 Brassica carinata HOM05D008524 ORTHO05D010700 1.9e-30 135.2 69 92.8
Thhalv10009900m.g Eutrema salsugineum HOM05D008524 ORTHO05D010700 7.4e-22 106.7 70 72.9
BcaC07g42082 Brassica carinata HOM05D008524 ORTHO05D010700 1.8e-20 102.1 70 70.0
A09p67110 Brassica napus HOM05D008524 ORTHO05D010700 9.1e-20 99.8 70 70.0
C08p51390 Brassica napus HOM05D008524 ORTHO05D010700 2.0e-19 98.6 70 70.0
BolC8t52665H Brassica oleracea HOM05D008524 ORTHO05D010700 2.0e-19 98.6 70 70.0
BcaC07g42144 Brassica carinata HOM05D008524 ORTHO05D010700 3.4e-19 97.8 70 68.6
BraA09t42044Z Brassica rapa HOM05D008524 ORTHO05D010700 7.7e-19 96.7 70 68.6
BcaC07g42083 Brassica carinata HOM05D008524 ORTHO05D010700 2.2e-18 95.1 70 67.1
AT1G06137 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 1.2e-16 89.4 67 65.7
Carub.0001s0547 Capsella rubella HOM05D008524 ORTHO05D010700 1.4e-15 85.9 68 64.7
BcaB06g28556 Brassica carinata HOM05D008524 ORTHO05D010700 6.7e-15 83.6 71 60.6
CARHR005650 Cardamine hirsuta HOM05D008524 ORTHO05D010700 1.3e-13 79.3 66 59.1
AL4G26560 Arabidopsis lyrata HOM05D008524 ORTHO05D010700 2.8e-13 78.2 70 57.1
BcaC02g11228 Brassica carinata HOM05D008524 ORTHO05D010700 1.8e-12 75.5 72 54.2
Carub.0001s0546 Capsella rubella HOM05D008524 ORTHO05D010700 1.8e-12 75.5 70 55.7
Aa31LG5G5610 Aethionema arabicum HOM05D008524 ORTHO05D010700 4.1e-12 74.3 71 53.5
THA.LOC104826208 Tarenaya hassleriana HOM05D008524 ORTHO05D010700 1.2e-11 72.8 70 51.4
AL4G26580 Arabidopsis lyrata HOM05D008524 ORTHO05D010700 1.6e-11 72.4 71 53.5
AT1G06135 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 1.6e-11 72.4 70 54.3
CARHR124950 Cardamine hirsuta HOM05D008524 ORTHO05D010700 4.5e-11 70.9 72 50.0
CARHR124970 Cardamine hirsuta HOM05D008524 ORTHO05D010700 4.5e-11 70.9 70 51.4
CARHR214280 Cardamine hirsuta HOM05D008524 ORTHO05D010700 4.5e-11 70.9 72 50.0
Carub.0004s1266 Capsella rubella HOM05D008524 ORTHO05D010700 5.9e-11 70.5 71 50.7
CARHR005640 Cardamine hirsuta HOM05D008524 ORTHO05D010700 7.7e-11 70.1 70 52.9
AT2G31345 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 1.0e-10 69.7 71 52.1
THA.LOC104800884 Tarenaya hassleriana HOM05D008524 ORTHO05D010700 1.7e-10 68.9 71 50.7
Sp4g13820 Schrenkiella parvula HOM05D008524 ORTHO05D010700 2.9e-10 68.2 69 52.2
Thhalv10017816m.g Eutrema salsugineum HOM05D008524 ORTHO05D010700 3.8e-10 67.8 69 55.1
BcaC02g07976 Brassica carinata HOM05D008524 ORTHO05D010700 1.1e-09 66.2 70 52.9
BolC4t27606H Brassica oleracea HOM05D008524 ORTHO05D010700 1.1e-09 66.2 70 52.9
Carub.0004s1264 Capsella rubella HOM05D008524 ORTHO05D010700 1.1e-09 66.2 71 52.1
BcaC01g05973 Brassica carinata HOM05D008524 ORTHO05D010700 2.5e-09 65.1 67 50.7
BcaC02g11230 Brassica carinata HOM05D008524 ORTHO05D010700 2.5e-09 65.1 70 52.9
BcaC02g11232 Brassica carinata HOM05D008524 ORTHO05D010700 3.2e-09 64.7 70 52.9
Aa31LG5G5630 Aethionema arabicum HOM05D008524 ORTHO05D010700 4.2e-09 64.3 69 46.4
A03p17480 Brassica napus HOM05D008524 ORTHO05D010700 4.2e-09 64.3 70 52.9
BcaB01g04049 Brassica carinata HOM05D008524 ORTHO05D010700 5.5e-09 63.9 68 50.0
BcaC01g05960 Brassica carinata HOM05D008524 ORTHO05D010700 5.5e-09 63.9 68 50.0
BcaC01g05959 Brassica carinata HOM05D008524 ORTHO05D010700 7.2e-09 63.5 69 52.2
BcaB06g28555 Brassica carinata HOM05D008524 ORTHO05D010700 9.4e-09 63.2 70 50.0
C04p61200 Brassica napus HOM05D000060 ORTHO05D000428 1.6e-08 62.4 73 49.3
AT2G31335 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 6.1e-08 60.5 61 47.5
Aa31LG1G7130 Aethionema arabicum HOM05D008524 ORTHO05D010700 2.3e-07 58.5 67 50.7
Aa31LG1G7140 Aethionema arabicum HOM05D008524 ORTHO05D010700 2.3e-07 58.5 69 49.3


User provided reference genes

Program Settings