Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24301 Brassica carinata HOM05D030240 ORTHO05D094818 6.1e-55 217.2 110 100.0
C05p04480 Brassica napus HOM05D030240 ORTHO05D031710 1.2e-37 159.8 82 98.8
BolC5t29219H Brassica oleracea HOM05D030240 ORTHO05D031710 1.2e-37 159.8 82 98.8
BcaB08g36905 Brassica carinata HOM05D000008 ORTHO05D000005 2.9e-12 75.5 63 61.9
BcaB01g05063 Brassica carinata HOM05D000008 ORTHO05D000005 2.4e-11 72.4 65 63.1
BolC3t13306H Brassica oleracea HOM05D000008 ORTHO05D000005 9.3e-11 70.5 65 61.5
C03p08080 Brassica napus HOM05D000008 ORTHO05D000005 1.2e-10 70.1 65 61.5
A03p07100 Brassica napus HOM05D000008 ORTHO05D000005 1.5e-08 63.2 60 60.0
BraA03t10032Z Brassica rapa HOM05D000008 ORTHO05D000005 1.5e-08 63.2 60 60.0
BcaC04g18958 Brassica carinata HOM05D000008 ORTHO05D000005 1.6e-07 59.7 60 56.7
C09p61800 Brassica napus HOM05D000008 ORTHO05D000005 1.6e-07 59.7 60 56.7
BolC9t59018H Brassica oleracea HOM05D000008 ORTHO05D000005 1.6e-07 59.7 60 56.7
Sp6g28760 Schrenkiella parvula HOM05D000008 ORTHO05D000005 1.1e-06 57.0 68 51.5
A10p23560 Brassica napus HOM05D000008 ORTHO05D000005 6.9e-06 54.3 69 50.7
BraA10t44422Z Brassica rapa HOM05D000008 ORTHO05D000005 6.9e-06 54.3 69 50.7
Thhalv10014101m.g Eutrema salsugineum HOM05D000008 ORTHO05D000005 9.0e-06 53.9 55 54.5


User provided reference genes

Program Settings