Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24287 Brassica carinata HOM05D008960 ORTHO05D032503 8.1e-86 320.5 173 100.0
C09p68970 Brassica napus HOM05D008960 ORTHO05D032503 6.2e-78 294.3 171 91.2
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 2.9e-75 285.4 173 90.2
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 2.9e-75 285.4 173 90.2
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 2.9e-75 285.4 173 90.2
BolC3t19742H Brassica oleracea HOM05D008960 ORTHO05D032503 3.2e-66 255.4 146 94.5
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 1.2e-65 253.4 143 95.1
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 1.1e-63 246.9 143 93.0
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 1.1e-63 246.9 143 93.0
BcaB04g20772 Brassica carinata HOM05D008960 ORTHO05D093326 1.9e-50 203.0 171 67.3
BcaC08g46605 Brassica carinata HOM05D008960 ORTHO05D093223 7.9e-49 197.6 173 67.1
C08p09880 Brassica napus HOM05D008960 ORTHO05D019923 1.3e-46 190.3 155 65.8
BolC8t48664H Brassica oleracea HOM05D008960 ORTHO05D019923 1.6e-46 189.9 155 65.8
BcaC01g00023 Brassica carinata HOM05D008960 ORTHO05D091451 2.2e-46 189.5 108 92.6
C03p49100 Brassica napus HOM05D008960 ORTHO05D019923 2.8e-46 189.1 154 64.9
BcaC07g38237 Brassica carinata HOM05D008960 ORTHO05D019923 4.8e-46 188.3 155 65.2
C02p03040 Brassica napus HOM05D008960 ORTHO05D019923 4.1e-45 185.3 154 64.9
C06p23680 Brassica napus HOM05D008960 ORTHO05D019923 2.0e-44 183.0 154 64.3
BraA10t42359Z Brassica rapa HOM05D008960 ORTHO05D019923 2.5e-42 176.0 155 62.6
C06p42770 Brassica napus HOM05D008960 ORTHO05D033710 2.5e-39 166.0 95 93.7
BcaC01g00787 Brassica carinata HOM05D008960 ORTHO05D094263 7.2e-34 147.9 84 91.7
BcaC06g35218 Brassica carinata HOM05D008960 ORTHO05D091464 2.4e-29 132.9 140 55.7
C06p39950 Brassica napus HOM05D011932 ORTHO05D023872 4.1e-29 132.1 173 53.8
BcaNung05738 Brassica carinata HOM05D011932 ORTHO05D023872 7.0e-29 131.3 173 53.2
BcaB06g25872 Brassica carinata HOM05D011932 ORTHO05D094935 5.9e-28 128.3 167 51.5
BcaC07g41369 Brassica carinata HOM05D011932 ORTHO05D024153 5.9e-28 128.3 173 52.6
BcaC08g46608 Brassica carinata HOM05D008960 ORTHO05D094201 7.7e-28 127.9 145 57.2
BcaC03g17616 Brassica carinata HOM05D011932 ORTHO05D024153 8.5e-27 124.4 173 52.6
BraA09t36250Z Brassica rapa HOM05D011932 ORTHO05D024153 1.1e-26 124.0 163 52.8
BraA09t40506Z Brassica rapa HOM05D011932 ORTHO05D023872 1.1e-26 124.0 163 52.8
BolC2t11672H Brassica oleracea HOM05D011932 ORTHO05D023872 2.5e-26 122.9 173 53.2
C03p18280 Brassica napus HOM05D008960 ORTHO05D021862 1.5e-23 113.6 173 50.3
BolC3t14226H Brassica oleracea HOM05D008960 ORTHO05D021862 1.5e-23 113.6 173 50.3
BolC3t14293H Brassica oleracea HOM05D008960 ORTHO05D021862 7.5e-23 111.3 173 49.1
BolC4t22728H Brassica oleracea HOM05D011932 ORTHO05D023872 2.8e-22 109.4 109 63.3
BcaC01g05426 Brassica carinata HOM05D008960 ORTHO05D021862 5.5e-18 95.1 104 60.6
BcaC01g06122 Brassica carinata HOM05D008960 ORTHO05D021862 1.6e-17 93.6 104 59.6
BcaB04g17812 Brassica carinata HOM05D008960 ORTHO05D021862 3.0e-16 89.4 139 45.3
C07p48840 Brassica napus HOM05D011932 ORTHO05D024153 9.8e-15 84.3 89 61.8
BolC7t45392H Brassica oleracea HOM05D011932 ORTHO05D024153 9.8e-15 84.3 89 61.8
A06p27480 Brassica napus HOM05D011932 ORTHO05D096777 4.5e-12 75.5 72 63.9
C07p18550 Brassica napus HOM05D008960 ORTHO05D103607 5.5e-10 68.6 55 61.8
C08p15900 Brassica napus HOM05D021780 ORTHO05D021716 4.9e-06 55.5 80 47.5
BolC8t49214H Brassica oleracea HOM05D021780 ORTHO05D021716 4.9e-06 55.5 80 47.5


User provided reference genes

Program Settings