Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g24015 Brassica carinata HOM05D001105 ORTHO05D001870 5.9e-47 190.7 105 100.0
BcaC04g24017 Brassica carinata HOM05D001105 ORTHO05D001870 5.9e-47 190.7 105 100.0
BolC9t53158H Brassica oleracea HOM05D001105 ORTHO05D001870 5.9e-47 190.7 105 100.0
C09p02300 Brassica napus HOM05D001105 ORTHO05D001870 1.7e-46 189.1 105 99.0
A09p02210 Brassica napus HOM05D001105 ORTHO05D001870 6.5e-38 160.6 104 75.0
BraA09t35870Z Brassica rapa HOM05D001105 ORTHO05D001870 6.5e-38 160.6 104 75.0
BcaB01g02000 Brassica carinata HOM05D001105 ORTHO05D001870 1.5e-29 132.9 123 57.7
Thhalv10029267m.g Eutrema salsugineum HOM05D001105 ORTHO05D001870 4.7e-28 127.9 131 51.9
Sp6g02840 Schrenkiella parvula HOM05D001105 ORTHO05D001870 1.5e-26 122.9 133 51.9
AL6G50120 Arabidopsis lyrata HOM05D001105 ORTHO05D001870 2.6e-26 122.1 131 54.2
AT4G02810 Arabidopsis thaliana HOM05D001105 ORTHO05D001870 1.1e-21 106.7 142 53.5
Carub.0006s3425 Capsella rubella HOM05D001105 ORTHO05D001870 4.2e-21 104.8 136 47.8
CARHR251180 Cardamine hirsuta HOM05D001105 ORTHO05D001870 2.1e-20 102.4 146 44.5
Aa31LG5G2430 Aethionema arabicum HOM05D001105 ORTHO05D001870 4.0e-19 98.2 113 52.2
BcaC05g24632 Brassica carinata HOM05D001105 ORTHO05D001870 5.2e-19 97.8 108 54.6
Thhalv10008552m.g Eutrema salsugineum HOM05D001105 ORTHO05D001870 6.8e-19 97.4 113 57.5
AT1G03170 Arabidopsis thaliana HOM05D001105 ORTHO05D001870 8.8e-19 97.1 108 56.5
CARHR002510 Cardamine hirsuta HOM05D001105 ORTHO05D001870 1.2e-18 96.7 112 58.9
AL1G12660 Arabidopsis lyrata HOM05D001105 ORTHO05D001870 2.6e-18 95.5 108 59.3
C05p01760 Brassica napus HOM05D001105 ORTHO05D001870 2.6e-18 95.5 108 53.7
BolC5t28954H Brassica oleracea HOM05D001105 ORTHO05D001870 2.6e-18 95.5 108 53.7
BcaC05g24553 Brassica carinata HOM05D001105 ORTHO05D001870 2.2e-17 92.4 114 57.0
A10p01780 Brassica napus HOM05D001105 ORTHO05D001870 2.8e-17 92.0 105 55.2
BraA10t42453Z Brassica rapa HOM05D001105 ORTHO05D001870 2.8e-17 92.0 105 56.2
Sp1g02190 Schrenkiella parvula HOM05D001105 ORTHO05D001870 4.8e-17 91.3 122 48.4
BolC8t46844H Brassica oleracea HOM05D001105 ORTHO05D001870 2.7e-15 85.5 110 52.7
C08p00450 Brassica napus HOM05D001105 ORTHO05D001870 3.5e-15 85.1 110 53.6
Carub.0001s0231 Capsella rubella HOM05D001105 ORTHO05D001870 1.3e-14 83.2 109 54.1
THA.LOC104801234 Tarenaya hassleriana HOM05D001105 ORTHO05D001870 2.2e-14 82.4 146 39.0
A08p37440 Brassica napus HOM05D001105 ORTHO05D001870 1.1e-13 80.1 114 48.2
BraA08t35642Z Brassica rapa HOM05D001105 ORTHO05D001870 1.1e-13 80.1 114 48.2
Aa31LG1G9360 Aethionema arabicum HOM05D001105 ORTHO05D001870 5.5e-13 77.8 110 57.3


User provided reference genes

Program Settings