Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23945 Brassica carinata HOM05D004754 ORTHO05D005566 5.7e-186 654.1 320 100.0
C09p03030 Brassica napus HOM05D004754 ORTHO05D005566 4.8e-185 651.0 320 99.4
BolC9t53233H Brassica oleracea HOM05D004754 ORTHO05D005566 4.3e-165 584.7 331 89.4
BraA09t35937Z Brassica rapa HOM05D004754 ORTHO05D005566 2.0e-162 575.9 329 88.1
A09p02940 Brassica napus HOM05D004754 ORTHO05D005566 7.5e-162 573.9 328 88.1
BcaB01g01919 Brassica carinata HOM05D004754 ORTHO05D005566 4.4e-154 548.1 329 83.0
Sp6g03640 Schrenkiella parvula HOM05D004754 ORTHO05D005566 6.0e-151 537.7 329 79.3
Carub.0006s3335 Capsella rubella HOM05D004754 ORTHO05D005566 6.8e-147 524.2 329 77.5
CARHR252140 Cardamine hirsuta HOM05D004754 ORTHO05D005566 8.9e-147 523.9 329 77.5
AL6G49030 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 8.3e-145 517.3 331 75.5
AT4G05440 Arabidopsis thaliana HOM05D004754 ORTHO05D005566 9.5e-141 503.8 328 74.7
Thhalv10028820m.g Eutrema salsugineum HOM05D004754 ORTHO05D005566 1.9e-136 489.6 327 72.2
THA.LOC104812357 Tarenaya hassleriana HOM05D004754 ORTHO05D005566 2.4e-131 472.6 327 69.1
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 7.1e-128 461.1 324 69.1
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 2.7e-127 459.1 325 67.4
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 2.7e-127 459.1 328 66.2
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 7.8e-127 457.6 324 67.6
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.0e-126 457.2 326 67.8
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 1.0e-126 457.2 326 67.8
RcHm_v2.0_Chr5g0052721 Rosa chinensis HOM05D004754 ORTHO05D005566 3.9e-126 455.3 329 66.6
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.1e-125 453.8 326 67.5
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 1.1e-125 453.8 326 67.5
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 1.5e-125 453.4 328 65.2
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 3.3e-125 452.2 328 66.2
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 4.3e-125 451.8 329 66.6
PGR031G3887 Punica granatum HOM05D004754 ORTHO05D005566 5.6e-125 451.4 323 66.6
CANSAT64G0220 Cannabis sativa HOM05D004754 ORTHO05D005566 7.3e-125 451.1 329 66.0
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 7.3e-125 451.1 328 64.9
ClCG03G006380 Citrullus lanatus HOM05D004754 ORTHO05D005566 1.3e-124 450.3 326 65.6
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 2.1e-124 449.5 328 64.6
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 3.6e-124 448.7 326 66.6
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 4.8e-124 448.4 327 66.4
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 4.8e-124 448.4 329 64.4
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 8.1e-124 447.6 327 64.2
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 1.1e-123 447.2 329 64.4
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 2.4e-123 446.0 329 65.0
Sed0000755 Sechium edule HOM05D004754 ORTHO05D005566 2.4e-123 446.0 326 65.0
CiPaw.12G121800 Carya illinoinensis HOM05D004754 ORTHO05D005566 4.0e-123 445.3 328 64.0
MD17G1076300 Malus domestica HOM05D004754 ORTHO05D005566 5.3e-123 444.9 328 65.2
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 5.3e-123 444.9 329 65.0
Sc12g0003070 Simmondsia chinensis HOM05D004754 ORTHO05D005566 6.9e-123 444.5 325 65.8
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 9.0e-123 444.1 327 63.6
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 1.2e-122 443.7 329 65.7
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 1.5e-122 443.4 329 63.5
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 1.5e-122 443.4 330 64.5
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 2.6e-122 442.6 325 66.5
Aa31LG9G9140 Aethionema arabicum HOM05D004754 ORTHO05D005566 2.6e-122 442.6 306 69.9
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 3.4e-122 442.2 329 64.7
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 4.5e-122 441.8 327 64.2
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 4.5e-122 441.8 327 63.3
CsaV3_1G039230 Cucumis sativus L. HOM05D004754 ORTHO05D005566 5.8e-122 441.4 327 64.5
VMungo1309G0019 Vigna mungo HOM05D004754 ORTHO05D005566 5.8e-122 441.4 326 63.2
MELO3C015347.2 Cucumis melo HOM05D004754 ORTHO05D005566 7.6e-122 441.0 326 64.7
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 7.6e-122 441.0 330 64.5
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 1.7e-121 439.9 327 65.1
Manes.10G102700 Manihot esculenta HOM05D004754 ORTHO05D005566 1.7e-121 439.9 327 64.8
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 1.7e-121 439.9 330 64.2
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 2.9e-121 439.1 326 64.4
SGA_v2.0_scaffold172G38987 Striga asiatica HOM05D004754 ORTHO05D005566 2.9e-121 439.1 331 63.7
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 8.4e-121 437.6 327 62.7
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 8.4e-121 437.6 326 64.7
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 1.4e-120 436.8 328 64.9
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 1.4e-120 436.8 328 64.9
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 4.2e-120 435.3 327 63.0
Sopen01g049820 Solanum pennellii HOM05D004754 ORTHO05D005566 7.1e-120 434.5 325 63.7
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 1.2e-119 433.7 327 61.8
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 1.2e-119 433.7 328 65.5
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 1.2e-119 433.7 327 62.4
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 1.2e-119 433.7 328 62.5
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 1.6e-119 433.3 333 62.2
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 2.7e-119 432.6 328 63.7
Potri.017G048600 Populus trichocarpa HOM05D004754 ORTHO05D005566 2.7e-119 432.6 328 64.9
Potri.007G112300 Populus trichocarpa HOM05D004754 ORTHO05D005566 6.0e-119 431.4 328 63.7
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.0e-118 430.6 326 64.1
CAN.G1231.9 Capsicum annuum HOM05D004754 ORTHO05D005566 1.3e-118 430.3 328 63.4
CAN.G3385.2 Capsicum annuum HOM05D004754 ORTHO05D005566 1.3e-118 430.3 328 63.4
Nitab4.5_0005392g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 1.8e-118 429.9 328 64.0
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 2.3e-118 429.5 328 63.4
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 2.3e-118 429.5 328 63.7
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 3.0e-118 429.1 327 61.8
Eucgr.E02475 Eucalyptus grandis HOM05D004754 ORTHO05D005566 3.0e-118 429.1 326 64.4
Migut.B00386 Erythranthe guttata HOM05D004754 ORTHO05D005566 6.7e-118 427.9 330 63.9
Lalb_Chr12g0204311 Lupinus albus HOM05D004754 ORTHO05D005566 8.7e-118 427.6 328 62.5
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 1.5e-117 426.8 327 62.4
Nitab4.5_0002815g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 2.5e-117 426.0 328 64.0
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 2.5e-117 426.0 329 61.4
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 3.3e-117 425.6 329 61.1
Manes.07G037300 Manihot esculenta HOM05D004754 ORTHO05D005566 9.6e-117 424.1 327 63.3
Hund19582 Selenicereus undatus HOM05D004754 ORTHO05D005566 1.6e-116 423.3 327 61.8
Sabra07G0091800 Salix brachista HOM05D004754 ORTHO05D005566 4.8e-116 421.8 328 62.5
MBI10_g08558_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 1.8e-115 419.9 327 62.1
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 3.1e-115 419.1 328 61.6
Oeu010398.1 Olea europaea HOM05D004754 ORTHO05D005566 3.1e-115 419.1 328 62.8
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 5.3e-115 418.3 327 61.8
MBI09_g11913_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 6.9e-115 417.9 335 61.2
Cc02_g19240 Coffea canephora HOM05D004754 ORTHO05D005566 1.2e-114 417.2 328 60.7
TAR626G0708 Trochodendron aralioides HOM05D004754 ORTHO05D005566 2.0e-114 416.4 325 62.2
unitig_21.g20734 Utricularia gibba HOM05D004754 ORTHO05D005566 5.8e-114 414.8 329 62.0
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 1.7e-113 413.3 328 62.2
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.4e-112 409.5 327 59.0
Haze_09498 Corylus avellana HOM05D004754 ORTHO05D005566 1.0e-110 404.1 337 58.2
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.1e-109 400.6 327 57.2
Lsat_1_v5_gn_9_95240 Lactuca sativa HOM05D004754 ORTHO05D005566 2.5e-109 399.4 332 58.4
Lalb_Chr12g0204271 Lupinus albus HOM05D004754 ORTHO05D005566 2.5e-109 399.4 328 60.1
Aqoxy7G03057 Aquilegia oxysepala HOM05D004754 ORTHO05D005566 1.8e-107 393.3 325 56.3
HanXRQChr03g0076141 Helianthus annuus HOM05D004754 ORTHO05D005566 9.0e-107 391.0 316 59.5
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 2.0e-106 389.8 327 59.0
MD09G1087500 Malus domestica HOM05D004754 ORTHO05D005566 2.2e-105 386.3 326 59.2
PGSC0003DMG400025770 Solanum tuberosum HOM05D004754 ORTHO05D005566 2.9e-105 386.0 299 62.2
ATR0584G072 Amborella trichopoda HOM05D004754 ORTHO05D005566 8.4e-105 384.4 377 50.9
CDE02G1350 Ceratophyllum demersum HOM05D004754 ORTHO05D005566 9.3e-104 380.9 322 58.1
GSVIVG01027347001 Vitis vinifera HOM05D004754 ORTHO05D005566 7.9e-103 377.9 326 58.3
GSVIVG01021588001 Vitis vinifera HOM05D004754 ORTHO05D005566 1.0e-102 377.5 326 58.9
PSO675G6933 Papaver somniferum HOM05D004754 ORTHO05D005566 8.7e-102 374.4 289 61.9
AL6G49110 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 5.9e-98 361.7 272 66.5
Lsat_1_v5_gn_9_95201 Lactuca sativa HOM05D004754 ORTHO05D005566 2.9e-97 359.4 328 55.2
RcHm_v2.0_Chr5g0052651 Rosa chinensis HOM05D004754 ORTHO05D005566 5.0e-97 358.6 289 61.6
Sc12g0003000 Simmondsia chinensis HOM05D004754 ORTHO05D005566 6.3e-92 341.7 241 67.2
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.8e-91 340.1 327 52.6
SMO144G0026 Selaginella moellendorffii HOM05D004754 ORTHO05D005566 3.9e-86 322.4 339 49.6
AagrBONN_evm.TU.Sc2ySwM_228.5754 Anthoceros agrestis HOM05D004754 ORTHO05D005566 2.8e-84 316.2 337 49.3
Actinidia13483 Actinidia chinensis HOM05D004754 ORTHO05D005566 1.4e-83 313.9 260 60.4
AagrBONN_evm.TU.Sc2ySwM_344.1746 Anthoceros agrestis HOM05D004754 ORTHO05D005566 3.4e-82 309.3 375 47.2
Pp3c20_22950 Physcomitrium patens HOM05D004754 ORTHO05D005566 9.4e-80 301.2 338 47.6
Atru.chr10.956 Acer truncatum HOM05D004754 ORTHO05D005566 4.1e-75 285.8 216 66.2
Gohir.D13G114400 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.6e-74 283.9 208 65.9
Medtr2g048690 Medicago truncatula HOM05D004754 ORTHO05D005566 1.7e-73 280.4 309 49.8
Mapoly0049s0079 Marchantia polymorpha HOM05D004754 ORTHO05D005566 1.9e-72 276.9 274 53.3
Zm00001eb126310 Zea mays HOM05D004754 ORTHO05D005566 7.2e-72 275.0 400 40.5
SEGI_36860 Sequoiadendron giganteum HOM05D004754 ORTHO05D005566 1.2e-69 267.7 328 44.8
Haze_09496 Corylus avellana HOM05D004754 ORTHO05D005566 8.0e-63 245.0 242 50.8
Sc10g0000250 Simmondsia chinensis HOM05D004754 ORTHO05D005566 7.5e-61 238.4 179 61.5
PRCOL_00002688 Prasinoderma coloniale HOM05D004754 ORTHO05D005566 2.5e-56 223.4 369 39.3
CBR_g50844 Chara braunii HOM05D004754 ORTHO05D005566 4.7e-55 219.2 185 53.0
QL05p054023 Quercus lobata HOM05D004754 ORTHO05D005566 4.9e-52 209.1 218 49.1
TPR.G5080 Trifolium pratense HOM05D004754 ORTHO05D005566 2.1e-47 193.7 147 62.6
MCO03G595 Micromonas commoda HOM05D004754 ORTHO05D005566 6.8e-46 188.7 242 42.1
Migut.N02733 Erythranthe guttata HOM05D004754 ORTHO05D005566 2.7e-42 176.8 143 62.2
HanXRQChr04g0094771 Helianthus annuus HOM05D004754 ORTHO05D005566 1.3e-41 174.5 150 53.3
HanXRQChr11g0343411 Helianthus annuus HOM05D004754 ORTHO05D005566 3.1e-38 163.3 136 55.1
HanXRQChr11g0343421 Helianthus annuus HOM05D004754 ORTHO05D005566 3.1e-38 163.3 136 55.1
ECA234G3378 Erigeron canadensis HOM05D004754 ORTHO05D000282 1.3e-36 157.9 134 56.7
VMungo1309G1961 Vigna mungo HOM05D004754 ORTHO05D005566 5.4e-35 152.5 325 33.2
Medtr8g072370 Medicago truncatula HOM05D004754 ORTHO05D005566 5.6e-24 115.9 152 42.8
Psat5g233560 Pisum sativum HOM05D004754 ORTHO05D005566 2.1e-23 114.0 109 52.3
Glyma.02G261300 Glycine max HOM05D004754 ORTHO05D005566 3.1e-22 110.2 88 62.5
Glyma.02G261200 Glycine max HOM05D004754 ORTHO05D005566 3.4e-21 106.7 90 55.6
Cre07.g312100 Chlamydomonas reinhardtii HOM05D004754 ORTHO05D005566 1.1e-19 101.7 405 25.4
HPP92_027351 Vanilla planifolia HOM05D004754 ORTHO05D005566 1.4e-14 84.7 75 52.0
Lj6C128T1 Lonicera japonica HOM05D004754 ORTHO05D005566 6.0e-10 69.3 67 53.7
Potri.017G049500 Populus trichocarpa HOM05D004754 ORTHO05D005566 3.9e-09 66.6 39 74.4
Lju897C0T7 Lonicera japonica HOM05D004754 ORTHO05D005566 1.3e-07 61.6 67 50.7
HPP92_027352 Vanilla planifolia HOM05D004754 ORTHO05D005566 1.1e-06 58.5 90 36.7
Potri.006G050600 Populus trichocarpa HOM05D004754 ORTHO05D005566 1.8e-06 57.8 51 58.8


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