Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 2.0e-89 332.4 172 100.0
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 2.0e-89 332.4 172 100.0
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 8.9e-85 317.0 172 96.5
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 3.2e-74 282.0 177 85.3
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 7.8e-73 277.3 177 83.6
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 9.3e-58 227.3 184 72.3
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 6.9e-53 211.1 181 65.7
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 5.1e-48 194.9 189 60.3
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 1.9e-47 193.0 178 62.9
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 9.6e-47 190.7 177 62.1
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 9.6e-47 190.7 177 62.1
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 4.8e-46 188.3 189 57.1
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 8.1e-46 187.6 178 61.2
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.1e-45 187.2 178 61.2
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 9.0e-45 184.1 177 60.5
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 3.4e-44 182.2 191 53.9
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 2.2e-43 179.5 187 54.5
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 7.1e-42 174.5 187 57.2
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 5.6e-39 164.9 178 53.4
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.8e-37 159.8 182 49.5
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.2e-33 147.1 172 50.6
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 1.8e-32 143.3 173 48.0
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 1.8e-32 143.3 168 47.6
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 6.7e-32 141.4 177 46.3
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 1.5e-31 140.2 183 45.9
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 5.7e-31 138.3 174 48.3
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 7.4e-31 137.9 175 48.6
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 6.3e-30 134.8 176 46.0
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 3.1e-29 132.5 174 48.3
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.1e-29 132.1 178 42.7
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 4.5e-28 128.6 178 46.6
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 5.9e-28 128.3 165 47.3
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 7.6e-28 127.9 185 44.9
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.0e-27 127.5 184 45.1
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 1.0e-27 127.5 184 41.3
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.3e-27 127.1 183 42.6
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 2.2e-27 126.3 179 39.7
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 2.9e-27 125.9 181 44.8
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.1e-26 124.0 175 45.1
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 3.2e-26 122.5 182 41.8
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 4.2e-26 122.1 171 42.7
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 4.2e-26 122.1 177 43.5
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 4.2e-26 122.1 174 46.6
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 5.5e-26 121.7 178 41.6
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 7.2e-26 121.3 180 45.6
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 7.2e-26 121.3 181 43.6
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 9.3e-26 120.9 183 41.5
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 1.2e-25 120.6 181 39.2
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.2e-25 120.6 168 42.3
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 3.6e-25 119.0 182 41.8
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 6.1e-25 118.2 175 45.1
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 7.9e-25 117.9 183 43.2
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 1.0e-24 117.5 174 44.3
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.3e-24 117.1 169 45.0
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 1.8e-24 116.7 180 36.7
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 8.7e-24 114.4 183 39.3
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 8.7e-24 114.4 176 42.0
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.1e-23 114.0 178 39.9
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.1e-23 114.0 178 41.0
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 4.3e-23 112.1 176 40.9
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 1.7e-22 110.2 177 41.8
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 1.7e-22 110.2 172 41.9
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 2.2e-22 109.8 180 40.0
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 2.8e-22 109.4 175 42.9
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 2.8e-22 109.4 174 40.8
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 3.7e-22 109.0 175 40.0
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 4.8e-22 108.6 166 40.4
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 4.8e-22 108.6 171 39.2
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 6.3e-22 108.2 177 36.2
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 6.3e-22 108.2 172 39.0
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 8.2e-22 107.8 183 38.8
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 8.2e-22 107.8 177 42.9
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.1e-21 107.5 133 47.4
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 1.1e-21 107.5 182 35.2
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 2.4e-21 106.3 177 42.4
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 3.1e-21 105.9 179 41.3
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 3.1e-21 105.9 171 37.4
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 4.1e-21 105.5 183 38.8
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 4.1e-21 105.5 155 41.9
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 6.9e-21 104.8 174 41.4
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 9.1e-21 104.4 174 37.4
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 1.2e-20 104.0 167 38.9
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.2e-20 104.0 177 40.1
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 2.6e-20 102.8 180 39.4
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 4.5e-20 102.1 180 37.8
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 5.9e-20 101.7 181 38.7
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 7.7e-20 101.3 180 38.9
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 7.7e-20 101.3 180 36.1
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 7.7e-20 101.3 177 36.7
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.0e-19 100.9 181 39.2
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.3e-19 100.5 172 37.8
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 2.2e-19 99.8 181 38.1
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.8e-19 99.0 181 38.1
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 8.5e-19 97.8 178 38.2
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 8.5e-19 97.8 184 37.0
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 5.5e-18 95.1 205 37.1
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 1.2e-17 94.0 182 38.5
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.7e-17 92.8 212 35.4
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 4.7e-17 92.0 190 35.3
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 6.1e-17 91.7 175 37.7
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.0e-16 90.9 177 32.8
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.0e-16 90.9 164 36.6
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 2.3e-16 89.7 176 34.7
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 3.9e-16 89.0 176 33.0
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.7e-14 83.6 178 31.5
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 2.2e-14 83.2 180 36.7
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 3.7e-14 82.4 175 36.0
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 2.4e-13 79.7 175 34.9
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 6.9e-13 78.2 180 32.2
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 6.9e-13 78.2 225 29.8
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.5e-12 77.0 177 31.1
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 2.6e-12 76.3 177 33.3
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 4.5e-12 75.5 185 32.4
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 4.5e-12 75.5 179 31.8
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 7.7e-12 74.7 162 34.6
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.0e-11 74.3 156 32.7
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 1.7e-11 73.6 183 31.7
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.9e-11 72.8 173 33.5
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 3.8e-11 72.4 180 31.7
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 6.5e-11 71.6 176 33.0
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.8e-08 63.5 54 61.1
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.2e-06 56.6 47 51.1
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.3e-06 55.1 52 51.9


User provided reference genes

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