Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23875 Brassica carinata HOM05D009946 ORTHO05D004401 9.9e-43 176.4 91 100.0
BolC9t53314H Brassica oleracea HOM05D009946 ORTHO05D004401 6.7e-31 137.1 75 94.7
C09p03880 Brassica napus HOM05D009946 ORTHO05D004401 9.6e-30 133.3 75 92.0
A09p03680 Brassica napus HOM05D009946 ORTHO05D004401 3.7e-29 131.3 75 90.7
BcaB04g19463 Brassica carinata HOM05D009946 ORTHO05D004401 4.5e-27 124.4 72 88.9
Sp2g17220 Schrenkiella parvula HOM05D009946 ORTHO05D004401 1.4e-25 119.4 75 84.0
AL5G18080 Arabidopsis lyrata HOM05D009946 ORTHO05D004401 1.9e-25 119.0 75 82.7
AT3G28455 Arabidopsis thaliana HOM05D009946 ORTHO05D004401 1.2e-24 116.3 75 80.0
C02p54790 Brassica napus HOM05D009946 ORTHO05D004401 2.7e-24 115.2 85 74.1
BcaC03g17517 Brassica carinata HOM05D009946 ORTHO05D004401 3.5e-24 114.8 74 81.1
BolC2t11540H Brassica oleracea HOM05D009946 ORTHO05D004401 3.5e-24 114.8 74 81.1
A02p35950 Brassica napus HOM05D009946 ORTHO05D004401 2.3e-23 112.1 85 72.9
BraA02t08594Z Brassica rapa HOM05D009946 ORTHO05D004401 2.3e-23 112.1 85 72.9
Thhalv10005220m.g Eutrema salsugineum HOM05D009946 ORTHO05D004401 2.3e-23 112.1 75 80.0
Carub.0005s0698 Capsella rubella HOM05D009946 ORTHO05D004401 3.0e-23 111.7 75 78.7
BraA09t36003Z Brassica rapa HOM05D009946 ORTHO05D004401 3.9e-23 111.3 75 77.3
CARHR292510 Cardamine hirsuta HOM05D009946 ORTHO05D004401 3.3e-22 108.2 75 73.3
C07p37510 Brassica napus HOM05D009946 ORTHO05D004401 2.0e-19 99.0 75 73.3
BolC7t44264H Brassica oleracea HOM05D009946 ORTHO05D004401 2.0e-19 99.0 75 73.3
BcaC06g33736 Brassica carinata HOM05D009946 ORTHO05D004401 5.9e-19 97.4 71 76.1
A06p40520 Brassica napus HOM05D009946 ORTHO05D004401 9.3e-17 90.1 75 65.3
BraA06t26971Z Brassica rapa HOM05D009946 ORTHO05D004401 9.3e-17 90.1 75 65.3
Aa31LG2G4620 Aethionema arabicum HOM05D009946 ORTHO05D004401 1.0e-15 86.7 93 57.0
Thhalv10028314m.g Eutrema salsugineum HOM05D009946 ORTHO05D004401 2.0e-11 72.4 73 56.2
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 6.1e-08 60.8 90 44.4
Sp7g02070 Schrenkiella parvula HOM05D009946 ORTHO05D004401 6.7e-07 57.4 69 50.7
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 2.0e-06 55.8 87 40.2
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 5.7e-06 54.3 81 45.7
COL.COLO4_36990 Corchorus olitorius HOM05D004965 ORTHO05D004401 7.4e-06 53.9 45 57.8
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 7.4e-06 53.9 82 41.5


User provided reference genes

Program Settings