Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23790 Brassica carinata HOM05D004982 ORTHO05D002186 2.7e-55 218.4 109 100.0
BcaB04g19561 Brassica carinata HOM05D004982 ORTHO05D002186 5.0e-17 91.3 45 100.0
C09p04650 Brassica napus HOM05D004982 ORTHO05D002186 5.0e-17 91.3 45 100.0
BolC9t53392H Brassica oleracea HOM05D004982 ORTHO05D002186 5.0e-17 91.3 45 100.0
BraA09t36071Z Brassica rapa HOM05D004982 ORTHO05D002186 5.0e-17 91.3 45 100.0
BcaB07g30005 Brassica carinata HOM05D004982 ORTHO05D002186 7.3e-16 87.4 45 95.6
BcaC03g17634 Brassica carinata HOM05D004982 ORTHO05D002186 7.3e-16 87.4 45 95.6
A02p37280 Brassica napus HOM05D004982 ORTHO05D002186 7.3e-16 87.4 45 95.6
BraA02t08714Z Brassica rapa HOM05D004982 ORTHO05D002186 7.3e-16 87.4 45 95.6
Sp2g18570 Schrenkiella parvula HOM05D004982 ORTHO05D002186 7.3e-16 87.4 45 95.6
A09p04340 Brassica napus HOM05D004982 ORTHO05D002186 9.5e-16 87.0 45 95.6
C02p56310 Brassica napus HOM05D004982 ORTHO05D002186 2.8e-15 85.5 45 93.3
BolC2t11687H Brassica oleracea HOM05D004982 ORTHO05D002186 2.8e-15 85.5 45 93.3
CARHR184160 Cardamine hirsuta HOM05D004982 ORTHO05D002186 8.0e-15 84.0 45 91.1
Thhalv10005063m.g Eutrema salsugineum HOM05D004982 ORTHO05D002186 8.0e-15 84.0 45 93.3
BcaB04g19555 Brassica carinata HOM05D004982 ORTHO05D002186 3.0e-14 82.0 45 91.1
BcaB04g19556 Brassica carinata HOM05D004982 ORTHO05D002186 3.0e-14 82.0 45 91.1
BcaC04g23789 Brassica carinata HOM05D004982 ORTHO05D002186 3.0e-14 82.0 45 91.1
C07p38930 Brassica napus HOM05D004982 ORTHO05D002186 1.2e-13 80.1 45 88.9
AT5G48170 Arabidopsis thaliana HOM05D004982 ORTHO05D002186 2.0e-13 79.3 44 88.6
A06p39340 Brassica napus HOM05D004982 ORTHO05D002186 3.4e-13 78.6 45 86.7
BraA06t26849Z Brassica rapa HOM05D004982 ORTHO05D002186 3.4e-13 78.6 45 86.7
BolC7t44413H Brassica oleracea HOM05D004982 ORTHO05D002186 5.8e-13 77.8 45 86.7
BcaC06g30821 Brassica carinata HOM05D004982 ORTHO05D002186 9.8e-13 77.0 45 86.7
AL8G20840 Arabidopsis lyrata HOM05D004982 ORTHO05D002186 3.7e-12 75.1 38 94.7
Carub.0008s0774 Capsella rubella HOM05D004982 ORTHO05D002186 3.2e-11 72.0 49 79.6
Aa31sc299G10 Aethionema arabicum HOM05D004982 ORTHO05D002186 3.6e-07 58.5 42 69.0


User provided reference genes

Program Settings