Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 4.4e-81 304.7 165 100.0
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 2.2e-80 302.4 163 100.0
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 1.5e-73 279.6 166 94.6
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 5.2e-66 254.6 170 87.1
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 5.2e-66 254.6 170 87.1
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 1.7e-64 249.6 170 84.1
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 9.2e-63 243.8 166 81.3
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 5.9e-62 241.1 166 81.9
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 1.7e-61 239.6 166 81.3
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 1.7e-61 239.6 166 81.3
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 3.3e-60 235.3 165 81.2
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 5.6e-60 234.6 165 80.6
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.2e-59 233.4 166 79.5
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 1.8e-58 229.6 168 79.2
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 3.1e-58 228.8 169 77.5
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.2e-57 226.9 165 79.4
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 2.6e-57 225.7 165 79.4
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 3.1e-42 175.6 165 61.8
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 1.2e-41 173.7 178 60.7
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 3.0e-37 159.1 169 60.9
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 8.6e-37 157.5 171 59.6
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 8.6e-37 157.5 156 64.7
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 2.1e-35 152.9 166 59.0
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 2.8e-35 152.5 112 79.5
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.1e-34 150.6 165 57.6
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 3.4e-33 145.6 149 55.0
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 8.4e-32 141.0 163 56.4
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 1.1e-31 140.6 156 60.3
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.4e-31 139.4 161 53.4
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 7.1e-31 137.9 162 50.0
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 9.3e-31 137.5 160 53.1
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.2e-30 137.1 160 53.1
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 2.1e-30 136.3 160 51.9
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 2.1e-30 136.3 161 50.9
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 3.5e-30 135.6 160 51.9
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 3.5e-30 135.6 164 50.6
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 4.6e-30 135.2 165 53.9
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.3e-29 133.7 162 50.0
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 5.1e-29 131.7 160 50.0
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 6.6e-29 131.3 162 49.4
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 8.7e-29 131.0 155 52.3
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.5e-28 129.4 162 53.1
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 4.3e-28 128.6 163 49.1
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 5.6e-28 128.3 161 49.7
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 5.6e-28 128.3 150 53.3
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 7.3e-28 127.9 161 48.4
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 2.1e-27 126.3 160 50.6
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 2.1e-27 126.3 162 51.9
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 2.1e-27 126.3 162 50.0
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 2.8e-27 125.9 163 49.1
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 3.6e-27 125.6 156 54.5
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 6.2e-27 124.8 162 52.5
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 8.1e-27 124.4 161 49.7
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 8.1e-27 124.4 159 50.9
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 1.8e-26 123.2 161 46.6
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 2.4e-26 122.9 164 47.0
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 4.0e-26 122.1 161 47.8
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 4.0e-26 122.1 150 49.3
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 4.0e-26 122.1 149 50.3
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 5.3e-26 121.7 165 49.1
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 9.0e-26 120.9 161 47.8
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 1.2e-25 120.6 162 48.1
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 1.2e-25 120.6 158 48.1
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.5e-25 120.2 167 48.5
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.5e-25 120.2 162 46.9
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.5e-25 120.2 164 48.8
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.5e-25 120.2 164 50.0
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 2.0e-25 119.8 159 50.3
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 2.0e-25 119.8 137 52.6
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 2.6e-25 119.4 165 46.7
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.6e-25 119.4 149 49.0
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 3.4e-25 119.0 169 47.3
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 4.5e-25 118.6 149 47.7
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 5.8e-25 118.2 161 45.3
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 5.8e-25 118.2 190 44.2
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 7.6e-25 117.9 162 47.5
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 1.3e-24 117.1 161 49.1
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.7e-24 116.7 164 48.2
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 3.8e-24 115.5 157 46.5
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 4.9e-24 115.2 165 46.1
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 6.4e-24 114.8 160 46.2
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 8.4e-24 114.4 158 45.6
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 1.1e-23 114.0 161 49.7
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.1e-23 114.0 167 46.7
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.4e-23 113.6 163 47.2
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 1.9e-23 113.2 160 45.0
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.4e-23 112.8 152 49.3
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 2.4e-23 112.8 158 48.1
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 3.2e-23 112.5 161 46.0
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 4.2e-23 112.1 163 45.4
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 5.4e-23 111.7 157 45.9
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 9.3e-23 110.9 174 47.1
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 1.6e-22 110.2 156 44.9
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.1e-22 109.8 163 44.8
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 2.1e-22 109.8 147 44.9
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 2.7e-22 109.4 132 48.5
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 4.6e-22 108.6 162 45.1
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 6.0e-22 108.2 166 47.6
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 6.0e-22 108.2 130 49.2
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 3.0e-21 105.9 129 48.8
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 3.9e-21 105.5 139 50.4
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 8.7e-21 104.4 165 44.8
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.1e-20 104.0 160 44.4
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 1.1e-20 104.0 172 43.6
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 1.5e-20 103.6 153 42.5
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.5e-20 103.6 161 42.2
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 4.3e-20 102.1 170 40.0
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 4.3e-20 102.1 165 44.8
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 5.6e-20 101.7 150 39.3
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 9.6e-20 100.9 163 41.7
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 2.1e-19 99.8 161 42.9
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.8e-19 99.4 159 44.7
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.8e-19 99.4 179 38.5
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 2.8e-19 99.4 164 43.3
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 2.8e-19 99.4 162 42.6
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 6.2e-19 98.2 151 42.4
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 6.2e-19 98.2 129 45.0
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 6.2e-19 98.2 147 46.9
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 8.1e-19 97.8 162 42.0
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.1e-18 97.4 157 45.9
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.1e-18 97.4 145 46.2
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 1.4e-18 97.1 174 40.8
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.1e-18 95.9 145 44.8
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 9.0e-18 94.4 177 40.7
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 9.0e-18 94.4 157 41.4
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.2e-17 94.0 120 47.5
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 1.5e-17 93.6 143 44.1
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 4.5e-17 92.0 121 48.8
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 4.5e-17 92.0 162 40.7
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 5.8e-17 91.7 160 41.9
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 9.9e-17 90.9 190 38.4
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.3e-16 90.5 167 41.3
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.9e-16 89.4 123 46.3
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 3.8e-16 89.0 131 45.0
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 4.9e-16 88.6 163 39.3
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 1.4e-15 87.0 159 35.2
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 1.4e-15 87.0 165 38.2
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 9.3e-15 84.3 146 41.1
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 9.3e-15 84.3 94 50.0
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 9.3e-15 84.3 94 50.0
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 9.3e-15 84.3 125 36.8
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 6.0e-14 81.6 167 41.3
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 3.9e-13 79.0 144 39.6
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 6.2e-11 71.6 148 36.5
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.0e-09 66.6 155 37.4
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 2.6e-09 66.2 155 37.4
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 3.4e-09 65.9 70 52.9
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 7.6e-09 64.7 166 34.9
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 7.6e-09 64.7 166 34.9
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.7e-08 63.5 155 36.1
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 4.9e-08 62.0 132 35.6
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 8.4e-08 61.2 74 47.3
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 1.1e-07 60.8 155 36.8
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 2.5e-07 59.7 90 38.9
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 5.5e-07 58.5 89 36.0
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 7.1e-07 58.2 79 50.6
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 2.7e-06 56.2 68 51.5


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