Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23667 Brassica carinata HOM05D000415 ORTHO05D027500 6.8e-57 223.8 114 100.0
C01p27670 Brassica napus HOM05D000415 ORTHO05D027500 8.9e-25 117.1 61 96.7
BolC9t53537H Brassica oleracea HOM05D000415 ORTHO05D027500 3.3e-19 98.6 61 86.9
Actinidia35132 Actinidia chinensis HOM05D000415 ORTHO05D017218 3.6e-10 68.6 56 67.9
C09p06170 Brassica napus HOM05D000415 ORTHO05D027500 3.4e-08 62.0 31 100.0
HPP92_014743 Vanilla planifolia HOM05D000415 ORTHO05D001916 6.4e-07 57.8 130 33.8
CSS0041773 Camellia sinensis var. sinensis HOM05D000415 ORTHO05D001916 1.9e-06 56.2 39 74.4
Ah.13g073610 Amaranthus hybridus HOM05D000415 ORTHO05D001916 2.4e-06 55.8 136 33.1
Actinidia16236 Actinidia chinensis HOM05D000415 ORTHO05D001916 3.2e-06 55.5 37 75.7
MBI01_g33726_MAGBIO Magnolia biondii HOM05D000415 ORTHO05D001916 3.2e-06 55.5 37 75.7
MBI01_g37443_MAGBIO Magnolia biondii HOM05D000415 ORTHO05D001916 3.2e-06 55.5 37 75.7
Cfa000490 Carpinus fangiana HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
CDE05G1938 Ceratophyllum demersum HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Cc04_g02750 Coffea canephora HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
COL.COLO4_30478 Corchorus olitorius HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Haze_06425 Corylus avellana HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Dinv37997 Davidia involucrata HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Nn2g11623 Nelumbo nucifera HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Nn8g39128 Nelumbo nucifera HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Potri.001G002500 Populus trichocarpa HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Potri.003G222400 Populus trichocarpa HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
QL01p010624 Quercus lobata HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Rhsim12G0202100 Rhododendron simsii HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Sabra01G0001800 Salix brachista HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Sabra03G0165400 Salix brachista HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
Sc11g0009400 Simmondsia chinensis HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
TWI34G1642 Tripterygium wilfordii HOM05D000415 ORTHO05D001916 4.2e-06 55.1 33 78.8
TAR623G0424 Trochodendron aralioides HOM05D000415 ORTHO05D000864 4.2e-06 55.1 37 75.7
vmacro16983 Vaccinium macrocarpon HOM05D000415 ORTHO05D001916 4.2e-06 55.1 37 75.7
CiPaw.13G177900 Carya illinoinensis HOM05D000415 ORTHO05D001916 5.5e-06 54.7 37 75.7
Duzib160G0145 Durio zibethinus HOM05D000415 ORTHO05D001916 5.5e-06 54.7 37 75.7
HanXRQChr03g0092611 Helianthus annuus HOM05D000415 ORTHO05D001916 5.5e-06 54.7 37 75.7
Lsat_1_v5_gn_2_50361 Lactuca sativa HOM05D000415 ORTHO05D001916 5.5e-06 54.7 37 75.7
Thecc.06G096800 Theobroma cacao HOM05D000415 ORTHO05D001916 5.5e-06 54.7 58 53.4
Aa31LG10G760 Aethionema arabicum HOM05D000415 ORTHO05D001916 7.1e-06 54.3 39 71.8
ATR0317G042 Amborella trichopoda HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 73.0
AL8G32260 Arabidopsis lyrata HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
AT5G56500 Arabidopsis thaliana HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
BcaB01g04403 Brassica carinata HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
BcaC01g06428 Brassica carinata HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
A03p13400 Brassica napus HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
C03p15660 Brassica napus HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
C09p48090 Brassica napus HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
BolC3t14000H Brassica oleracea HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
BolC9t57657H Brassica oleracea HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
BraA03t10646Z Brassica rapa HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
CARHR270140 Cardamine hirsuta HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
CDE01G0828 Ceratophyllum demersum HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 73.0
CDE12G0519 Ceratophyllum demersum HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 73.0
Thhalv10013030m.g Eutrema salsugineum HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 75.7
TPR.G12985 Trifolium pratense HOM05D000415 ORTHO05D001916 9.3e-06 53.9 37 73.0


User provided reference genes

Program Settings