Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23659 Brassica carinata HOM05D012757 ORTHO05D010927 2.3e-111 405.6 211 100.0
C09p06040 Brassica napus HOM05D012757 ORTHO05D010927 2.3e-111 405.6 211 100.0
BolC9t53529H Brassica oleracea HOM05D012757 ORTHO05D010927 2.3e-111 405.6 211 100.0
BraA09t36196Z Brassica rapa HOM05D012757 ORTHO05D010927 3.1e-103 378.6 215 93.0
A09p05550 Brassica napus HOM05D012757 ORTHO05D010927 2.0e-102 375.9 215 92.6
BcaB04g19697 Brassica carinata HOM05D012757 ORTHO05D010927 2.5e-73 279.3 214 72.9
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 4.1e-47 192.2 171 64.9
Carub.0006s2463 Capsella rubella HOM05D012757 ORTHO05D010927 3.1e-39 166.0 160 62.5
AT5G27020 Arabidopsis thaliana HOM05D012757 ORTHO05D010927 4.5e-38 162.2 170 62.4
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 1.1e-33 147.5 174 55.2
Carub.0006s2524 Capsella rubella HOM05D012757 ORTHO05D010927 1.7e-21 107.1 117 55.6
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 1.6e-19 100.5 194 41.8
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 3.6e-11 72.8 205 31.2
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 6.8e-10 68.6 124 33.1
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 1.2e-09 67.8 73 49.3
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 5.7e-09 65.5 67 46.3
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 7.5e-09 65.1 56 53.6
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 7.5e-09 65.1 74 48.6
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 9.8e-09 64.7 71 43.7
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 2.2e-08 63.5 39 74.4
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 3.7e-08 62.8 86 37.2
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 1.1e-07 61.2 34 70.6
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 1.1e-07 61.2 34 70.6
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 1.8e-07 60.5 171 28.7
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 1.8e-07 60.5 102 41.2
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 2.4e-07 60.1 37 67.6
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 3.1e-07 59.7 54 53.7
Potri.013G011950 Populus trichocarpa HOM05D015247 ORTHO05D010927 3.1e-07 59.7 34 73.5
Rhsim05G0136000 Rhododendron simsii HOM05D010455 ORTHO05D010927 3.1e-07 59.7 189 30.7
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 5.4e-07 58.9 58 48.3
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 5.4e-07 58.9 39 61.5
QL03p018916 Quercus lobata HOM05D015247 ORTHO05D010927 5.4e-07 58.9 176 33.0
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 3.5e-06 56.2 147 29.9
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 3.5e-06 56.2 147 29.9
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 5.9e-06 55.5 128 32.8
AUR62005244 Chenopodium quinoa HOM05D031177 ORTHO05D026471 7.7e-06 55.1 151 29.1


User provided reference genes

Program Settings