Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23649 Brassica carinata HOM05D008496 ORTHO05D010729 2.8e-146 521.9 267 100.0
BcaC04g23653 Brassica carinata HOM05D008496 ORTHO05D010729 5.0e-143 511.1 267 98.1
C09p06000 Brassica napus HOM05D008496 ORTHO05D010729 1.1e-142 510.0 267 97.8
BolC9t53525H Brassica oleracea HOM05D008496 ORTHO05D010729 1.1e-142 510.0 267 97.8
C09p05980 Brassica napus HOM05D008496 ORTHO05D010729 8.0e-141 503.8 267 96.6
BolC9t53523H Brassica oleracea HOM05D008496 ORTHO05D010729 8.0e-141 503.8 267 96.6
A09p05500 Brassica napus HOM05D008496 ORTHO05D010729 2.0e-131 472.6 270 93.0
BraA09t36189Z Brassica rapa HOM05D008496 ORTHO05D010729 3.4e-131 471.9 272 92.3
C09p05990 Brassica napus HOM05D008496 ORTHO05D010729 4.7e-125 451.4 282 83.3
BolC9t53524H Brassica oleracea HOM05D008496 ORTHO05D010729 2.8e-122 442.2 277 83.0
BcaC04g23651 Brassica carinata HOM05D008496 ORTHO05D010729 6.3e-122 441.0 277 82.7
BraA09t36187Z Brassica rapa HOM05D008496 ORTHO05D010729 1.1e-121 440.3 277 84.5
A09p05490 Brassica napus HOM05D008496 ORTHO05D010729 2.0e-120 436.0 277 84.1
BcaB04g19694 Brassica carinata HOM05D008496 ORTHO05D010729 2.6e-99 365.9 273 72.9
BcaB04g19693 Brassica carinata HOM05D008496 ORTHO05D010729 1.3e-61 240.7 259 53.3
BraA02t08856Z Brassica rapa HOM05D008496 ORTHO05D010729 1.1e-60 237.7 286 53.5
A02p38800 Brassica napus HOM05D008496 ORTHO05D010729 5.3e-60 235.3 286 53.1
Sp2g21000 Schrenkiella parvula HOM05D008496 ORTHO05D010729 5.3e-60 235.3 288 51.7
C02p58360 Brassica napus HOM05D008496 ORTHO05D010729 6.9e-60 235.0 286 53.1
BcaC03g17812 Brassica carinata HOM05D008496 ORTHO05D010729 2.6e-59 233.0 286 52.8
BolC2t11900H Brassica oleracea HOM05D008496 ORTHO05D010729 2.6e-59 233.0 286 52.8
A06p37240 Brassica napus HOM05D008496 ORTHO05D010729 2.3e-55 219.9 303 49.8
BraA06t26648Z Brassica rapa HOM05D008496 ORTHO05D010729 2.3e-55 219.9 303 49.8
C07p41230 Brassica napus HOM05D008496 ORTHO05D010729 7.4e-54 214.9 303 50.2
BcaB07g34208 Brassica carinata HOM05D008496 ORTHO05D010729 1.3e-53 214.2 286 49.0
BolC7t44648H Brassica oleracea HOM05D008496 ORTHO05D010729 1.3e-53 214.2 303 49.5
BcaC04g23648 Brassica carinata HOM05D008496 ORTHO05D010729 2.1e-53 213.4 280 49.3
AT5G27880 Arabidopsis thaliana HOM05D008496 ORTHO05D010729 1.8e-52 210.3 284 50.0
Thhalv10005521m.g Eutrema salsugineum HOM05D008496 ORTHO05D010729 9.0e-52 208.0 294 49.0
A09p05480 Brassica napus HOM05D008496 ORTHO05D010729 2.0e-51 206.8 284 50.7
BraA09t36186Z Brassica rapa HOM05D008496 ORTHO05D010729 3.4e-51 206.1 284 50.7
C09p05960 Brassica napus HOM05D008496 ORTHO05D010729 1.0e-50 204.5 375 43.5
BolC9t53521H Brassica oleracea HOM05D008496 ORTHO05D010729 1.0e-50 204.5 375 43.5
BcaNung04743 Brassica carinata HOM05D008496 ORTHO05D010729 4.6e-48 195.7 247 49.8
Carub.0006s2470 Capsella rubella HOM05D008496 ORTHO05D010729 1.0e-47 194.5 281 44.8
AL6G39050 Arabidopsis lyrata HOM05D008496 ORTHO05D010729 8.7e-47 191.4 278 47.1
CARHR186360 Cardamine hirsuta HOM05D008496 ORTHO05D010729 4.3e-46 189.1 285 44.9
CARHR183000 Cardamine hirsuta HOM05D008496 ORTHO05D010729 2.2e-45 186.8 289 47.4
CARHR266170 Cardamine hirsuta HOM05D008496 ORTHO05D010729 8.2e-45 184.9 271 46.1
BcaC03g17813 Brassica carinata HOM05D008496 ORTHO05D010729 5.5e-41 172.2 151 63.6
CARHR182960 Cardamine hirsuta HOM05D008496 ORTHO05D010729 2.1e-40 170.2 260 46.5
CARHR292220 Cardamine hirsuta HOM05D008496 ORTHO05D010729 5.5e-33 145.6 278 42.1
CARHR289360 Cardamine hirsuta HOM05D008496 ORTHO05D010729 3.9e-31 139.4 323 37.2
CARHR292330 Cardamine hirsuta HOM05D008496 ORTHO05D010729 2.6e-22 110.2 285 34.7
Aa31LG11G9630 Aethionema arabicum HOM05D008496 ORTHO05D010729 3.5e-19 99.8 226 35.0
C09p05970 Brassica napus HOM05D012099 ORTHO05D014504 9.1e-12 75.1 36 94.4
CARHR182990 Cardamine hirsuta HOM05D008496 ORTHO05D010729 1.4e-07 61.2 73 47.9
THA.LOC104820093 Tarenaya hassleriana HOM05D008496 ORTHO05D010729 1.4e-07 61.2 307 27.0
THA.LOC104803109 Tarenaya hassleriana HOM05D008496 ORTHO05D010729 3.0e-07 60.1 292 26.0
THA.LOC104821880 Tarenaya hassleriana HOM05D008496 ORTHO05D010729 5.2e-07 59.3 193 32.1
CARHR182980 Cardamine hirsuta HOM05D008496 ORTHO05D010729 8.8e-07 58.5 109 37.6
CsaV3_5G023110 Cucumis sativus L. HOM05D004123 ORTHO05D004768 2.6e-06 57.0 226 27.4
MELO3C003021.2 Cucumis melo HOM05D004123 ORTHO05D004768 4.4e-06 56.2 192 29.7


User provided reference genes

Program Settings