Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23601 Brassica carinata HOM05D011096 ORTHO05D013679 4.4e-97 357.8 168 100.0
BcaB04g19750 Brassica carinata HOM05D011096 ORTHO05D013679 9.3e-79 297.0 167 83.8
AL5G44710 Arabidopsis lyrata HOM05D011096 ORTHO05D013679 6.5e-56 221.1 163 63.8
CARHR187370 Cardamine hirsuta HOM05D011096 ORTHO05D013679 4.2e-55 218.4 164 67.1
CARHR152950 Cardamine hirsuta HOM05D011096 ORTHO05D013679 2.2e-51 206.1 152 60.5
Carub.0005s0989 Capsella rubella HOM05D011096 ORTHO05D013679 8.2e-51 204.1 152 59.9
AT3G44170 Arabidopsis thaliana HOM05D011096 ORTHO05D013679 5.3e-50 201.4 154 58.4
Sp5g17170 Schrenkiella parvula HOM05D011096 ORTHO05D013679 5.3e-50 201.4 154 59.7
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 9.1e-50 200.7 146 72.6
BcaC01g02072 Brassica carinata HOM05D011096 ORTHO05D013679 2.2e-48 196.1 153 61.4
BolC3t19143H Brassica oleracea HOM05D011096 ORTHO05D013679 2.2e-48 196.1 153 61.4
BraA06t25305Z Brassica rapa HOM05D011096 ORTHO05D013679 3.8e-48 195.3 153 61.4
Thhalv10011134m.g Eutrema salsugineum HOM05D011096 ORTHO05D013679 1.4e-47 193.4 152 57.2
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 1.1e-44 183.7 148 68.9
Aa31LG4G13400 Aethionema arabicum HOM05D011096 ORTHO05D013679 3.3e-44 182.2 159 52.2
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 5.7e-44 181.4 148 68.2
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 1.8e-37 159.8 167 49.7
AL5G22200 Arabidopsis lyrata HOM05D011096 ORTHO05D013679 8.8e-37 157.5 103 62.1
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 9.1e-34 147.5 145 58.6
C03p68880 Brassica napus HOM05D011096 ORTHO05D013679 1.8e-29 133.3 136 52.9
A06p22140 Brassica napus HOM05D011096 ORTHO05D013679 2.3e-29 132.9 136 52.9
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 9.8e-28 127.5 94 64.9
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 1.3e-19 100.5 60 68.3
A02p39200 Brassica napus HOM05D012138 ORTHO05D014405 6.3e-19 98.2 121 41.3
BraA02t08885Z Brassica rapa HOM05D012138 ORTHO05D014405 6.3e-19 98.2 121 41.3
AL5G44720 Arabidopsis lyrata HOM05D012138 ORTHO05D014405 1.1e-18 97.4 122 41.0
AT5G26100 Arabidopsis thaliana HOM05D012138 ORTHO05D014405 1.1e-18 97.4 122 39.3
BolC2t11939H Brassica oleracea HOM05D012138 ORTHO05D014405 1.4e-18 97.1 121 40.5
Sp2g21630 Schrenkiella parvula HOM05D012138 ORTHO05D014405 1.8e-18 96.7 121 39.7
BcaB07g29946 Brassica carinata HOM05D012138 ORTHO05D014405 4.1e-18 95.5 121 39.7
CARHR187380 Cardamine hirsuta HOM05D012138 ORTHO05D014405 5.4e-18 95.1 121 35.5
Thhalv10005510m.g Eutrema salsugineum HOM05D012138 ORTHO05D014405 1.2e-17 94.0 121 38.0
BcaC03g17840 Brassica carinata HOM05D012138 ORTHO05D014405 4.5e-17 92.0 163 37.4
C02p58800 Brassica napus HOM05D012138 ORTHO05D014405 4.5e-17 92.0 163 37.4
THA.LOC104811312 Tarenaya hassleriana HOM05D012138 ORTHO05D014405 1.3e-16 90.5 131 39.7
Carub.0006s2386 Capsella rubella HOM05D012138 ORTHO05D014405 3.8e-16 89.0 125 36.8
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 2.5e-15 86.3 60 53.3
BcaNung03979 Brassica carinata HOM05D012138 ORTHO05D014405 2.3e-13 79.7 121 37.2


User provided reference genes

Program Settings