Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 1.7e-90 335.9 155 100.0
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 9.8e-83 310.1 163 89.6
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 9.5e-78 293.5 151 91.4
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 1.0e-76 290.0 151 90.7
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 1.1e-73 280.0 144 91.7
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 2.7e-72 275.4 143 90.2
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 3.5e-72 275.0 163 79.8
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 6.0e-72 274.2 163 79.8
BcaB07g32008 Brassica carinata HOM05D008154 ORTHO05D012557 5.0e-71 271.2 163 79.8
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 8.6e-71 270.4 163 78.5
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 1.1e-70 270.0 163 79.1
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 1.1e-70 270.0 163 79.1
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 4.7e-69 264.6 151 81.5
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 5.8e-67 257.7 151 80.1
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 1.2e-64 250.0 163 71.2
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 5.1e-63 244.6 144 78.5
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 8.6e-63 243.8 144 78.5
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 1.5e-62 243.0 151 77.5
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 2.2e-58 229.2 157 68.2
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 3.5e-56 221.9 161 62.7
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 3.6e-45 185.3 160 53.8
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 5.8e-27 124.8 163 41.7
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 1.9e-25 119.8 166 41.0
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 2.5e-25 119.4 161 41.6
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 1.2e-24 117.1 158 41.1
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 1.2e-24 117.1 158 41.1
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 1.6e-24 116.7 158 41.1
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 1.6e-24 116.7 158 41.8
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 1.6e-24 116.7 158 41.8
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 3.5e-24 115.5 158 41.1
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 3.5e-24 115.5 158 41.1
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 4.6e-24 115.2 158 40.5
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 4.6e-24 115.2 158 41.1
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 6.0e-24 114.8 161 39.8
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 6.0e-24 114.8 158 41.1
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 1.8e-23 113.2 161 38.5
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 1.5e-22 110.2 166 38.6
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 9.6e-22 107.5 158 39.2
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 6.2e-21 104.8 134 40.3
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 2.4e-20 102.8 158 40.5
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 1.6e-08 63.5 160 33.8
BcaNung02650 Brassica carinata HOM05D008154 ORTHO05D012061 4.6e-08 62.0 153 32.7
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 6.1e-08 61.6 153 32.0
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 1.8e-07 60.1 151 32.5
BcaB01g05451 Brassica carinata HOM05D008154 ORTHO05D012061 3.0e-07 59.3 152 31.6
A02p01230 Brassica napus HOM05D008154 ORTHO05D012061 3.9e-07 58.9 153 30.7
BraA02t05102Z Brassica rapa HOM05D008154 ORTHO05D012061 3.9e-07 58.9 153 30.7
BcaC03g13395 Brassica carinata HOM05D008154 ORTHO05D012061 5.1e-07 58.5 153 30.1
C02p05410 Brassica napus HOM05D008154 ORTHO05D012061 5.1e-07 58.5 153 30.1
BolC2t06489H Brassica oleracea HOM05D008154 ORTHO05D012061 5.1e-07 58.5 153 30.1
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 6.7e-07 58.2 158 29.1
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 1.1e-06 57.4 159 31.4
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 4.3e-06 55.5 158 30.4
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 7.4e-06 54.7 160 29.4
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 7.4e-06 54.7 157 33.1
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 9.7e-06 54.3 107 34.6
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 9.7e-06 54.3 160 29.4


User provided reference genes

Program Settings