Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 1.4e-89 332.8 157 100.0
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 1.4e-89 332.8 157 100.0
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 1.4e-89 332.8 157 100.0
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 3.9e-87 324.7 157 96.2
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 3.3e-86 321.6 157 95.5
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 2.9e-82 308.5 157 90.4
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 6.7e-71 270.8 157 78.3
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 1.9e-70 269.2 158 77.2
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 4.3e-70 268.1 158 77.8
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 4.3e-70 268.1 158 77.8
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 1.3e-69 266.5 158 77.2
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 2.8e-69 265.4 158 77.8
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 1.4e-68 263.1 158 75.3
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 4.5e-67 258.1 163 74.8
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 2.2e-66 255.8 158 75.3
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 4.9e-66 254.6 161 73.9
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 7.1e-65 250.8 161 74.5
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 7.9e-64 247.3 144 77.8
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 3.9e-63 245.0 154 74.0
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 1.9e-54 216.1 154 64.9
C02p58780 Brassica napus HOM05D008373 ORTHO05D010873 1.8e-47 193.0 116 76.7
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 2.8e-45 185.7 154 57.1
BolC2t11937H Brassica oleracea HOM05D008373 ORTHO05D010873 3.7e-45 185.3 117 75.2
BcaC03g17838 Brassica carinata HOM05D000073 ORTHO05D008214 5.9e-43 177.9 144 60.4
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 1.7e-34 149.8 146 47.9
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 3.7e-29 132.1 150 46.7
A02p01220 Brassica napus HOM05D008373 ORTHO05D010873 5.0e-26 121.7 141 40.4
BraA02t05101Z Brassica rapa HOM05D008373 ORTHO05D010873 5.0e-26 121.7 141 40.4
CARHR187310 Cardamine hirsuta HOM05D008373 ORTHO05D010873 1.9e-25 119.8 79 68.4
BolC2t06488H Brassica oleracea HOM05D008373 ORTHO05D010873 7.2e-25 117.9 141 39.7
BcaC03g13394 Brassica carinata HOM05D008373 ORTHO05D010873 1.2e-24 117.1 141 39.7
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 1.2e-24 117.1 142 40.1
BcaNung02651 Brassica carinata HOM05D008373 ORTHO05D010873 1.0e-23 114.0 141 37.6
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 5.2e-23 111.7 153 37.3
THA.LOC104811314 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.5e-22 110.2 146 41.1
Sp6g31780 Schrenkiella parvula HOM05D008373 ORTHO05D010873 4.8e-21 105.1 142 35.9
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 6.3e-21 104.8 145 38.6
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 8.3e-21 104.4 142 36.6
A10p25930 Brassica napus HOM05D008373 ORTHO05D010873 1.4e-20 103.6 142 38.0
BolC9t59329H Brassica oleracea HOM05D008373 ORTHO05D010873 1.8e-20 103.2 142 37.3
C09p65010 Brassica napus HOM05D008373 ORTHO05D010873 9.1e-20 100.9 148 37.2
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 9.1e-20 100.9 142 37.3
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 9.1e-20 100.9 142 37.3
BcaC04g19192 Brassica carinata HOM05D008373 ORTHO05D010873 2.0e-19 99.8 148 36.5
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 2.9e-18 95.9 142 35.2
CARHR201340 Cardamine hirsuta HOM05D008373 ORTHO05D010873 5.5e-17 91.7 142 32.4
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 2.8e-13 79.3 127 33.1
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 2.8e-13 79.3 106 37.7
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 8.3e-13 77.8 125 35.2
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 1.1e-12 77.4 124 33.1
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 1.8e-12 76.6 124 33.1
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 1.8e-12 76.6 124 33.1
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 1.8e-12 76.6 124 33.1
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 1.8e-12 76.6 124 33.1
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 1.8e-12 76.6 152 30.9
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 4.1e-12 75.5 106 36.8
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 5.4e-12 75.1 134 33.6
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 2.9e-10 69.3 151 29.1
PSO675G7596 Papaver somniferum HOM05D000256 ORTHO05D000119 2.3e-07 59.7 116 31.0


User provided reference genes

Program Settings