Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23577 Brassica carinata HOM05D001431 ORTHO05D001268 6.7e-107 390.6 181 100.0
BcaNung06283 Brassica carinata HOM05D001431 ORTHO05D001268 7.2e-61 237.7 115 98.3
C09p06900 Brassica napus HOM05D001431 ORTHO05D001268 4.7e-60 235.0 115 97.4
BolC9t53610H Brassica oleracea HOM05D001431 ORTHO05D001268 6.7e-59 231.1 115 95.7
A09p06250 Brassica napus HOM05D001431 ORTHO05D001268 9.7e-58 227.3 115 92.2
BraA09t36269Z Brassica rapa HOM05D001431 ORTHO05D001268 9.7e-58 227.3 115 92.2
BcaB04g19797 Brassica carinata HOM05D001431 ORTHO05D001268 8.0e-52 207.6 116 88.8
Sp2g22300 Schrenkiella parvula HOM05D001431 ORTHO05D001268 2.2e-41 172.9 119 78.2
AL6G36880 Arabidopsis lyrata HOM05D001431 ORTHO05D001268 3.1e-40 169.1 126 73.8
Thhalv10005131m.g Eutrema salsugineum HOM05D001431 ORTHO05D001268 1.6e-39 166.8 118 74.6
CARHR188250 Cardamine hirsuta HOM05D001431 ORTHO05D001268 3.5e-39 165.6 123 74.0
AT5G25240 Arabidopsis thaliana HOM05D001431 ORTHO05D001268 1.7e-38 163.3 124 72.6
C02p59750 Brassica napus HOM05D001431 ORTHO05D001268 2.8e-36 156.0 120 70.8
BolC2t12031H Brassica oleracea HOM05D001431 ORTHO05D001268 1.0e-35 154.1 120 70.0
A02p39860 Brassica napus HOM05D001431 ORTHO05D001268 2.3e-35 152.9 120 70.0
BraA02t08948Z Brassica rapa HOM05D001431 ORTHO05D001268 3.1e-35 152.5 120 69.2
Carub.0006s2305 Capsella rubella HOM05D001431 ORTHO05D001268 2.0e-31 139.8 134 62.7
THA.LOC104814117 Tarenaya hassleriana HOM05D001431 ORTHO05D001268 5.1e-22 108.6 118 54.2
Duzib168G0286 Durio zibethinus HOM05D001431 ORTHO05D001268 6.8e-11 71.6 116 40.5
Sabra06G0202700 Salix brachista HOM05D001431 ORTHO05D001268 2.0e-10 70.1 134 36.6
Potri.006G259300 Populus trichocarpa HOM05D001431 ORTHO05D001268 5.8e-10 68.6 127 40.9
Duzib187G1968 Durio zibethinus HOM05D001431 ORTHO05D001268 7.6e-10 68.2 99 43.4
COL.COLO4_18913 Corchorus olitorius HOM05D001431 ORTHO05D001268 1.3e-09 67.4 116 39.7
Gorai.010G117000 Gossypium raimondii HOM05D001431 ORTHO05D001268 1.3e-09 67.4 99 42.4
Thecc.09G141800 Theobroma cacao HOM05D001431 ORTHO05D001268 2.2e-09 66.6 117 39.3
Gohir.D06G102000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 2.9e-09 66.2 100 43.0
TAR383G0017 Trochodendron aralioides HOM05D001431 ORTHO05D001268 3.8e-09 65.9 118 39.8
HanXRQChr03g0064021 Helianthus annuus HOM05D001431 ORTHO05D001268 1.9e-08 63.5 104 38.5
Medtr2g461190 Medicago truncatula HOM05D001431 ORTHO05D001268 1.9e-08 63.5 113 36.3
Prupe.1G486100 Prunus persica HOM05D001431 ORTHO05D001268 1.9e-08 63.5 109 42.2
TAR626G1912 Trochodendron aralioides HOM05D001431 ORTHO05D001268 1.9e-08 63.5 101 40.6
Ca_27061_v3 Cicer arietinum L. HOM05D001431 ORTHO05D001268 2.4e-08 63.2 111 37.8
Lj6g0025598 Lotus japonicus HOM05D001431 ORTHO05D001268 2.4e-08 63.2 113 40.7
TPR.G22802 Trifolium pratense HOM05D001431 ORTHO05D001268 4.2e-08 62.4 120 35.8
Glyma.15G202100 Glycine max HOM05D001431 ORTHO05D001268 5.4e-08 62.0 114 38.6
MD15G1130700 Malus domestica HOM05D001431 ORTHO05D001268 9.3e-08 61.2 100 44.0
Psat0ss25082g0080 Pisum sativum HOM05D001431 ORTHO05D001268 9.3e-08 61.2 110 39.1
Glyma.09G095800 Glycine max HOM05D001431 ORTHO05D001268 1.2e-07 60.8 116 40.5
Medtr4g106650 Medicago truncatula HOM05D001431 ORTHO05D001268 1.2e-07 60.8 89 41.6
Eucgr.C00435 Eucalyptus grandis HOM05D001431 ORTHO05D001268 1.6e-07 60.5 106 36.8
Glyma.13G157400 Glycine max HOM05D001431 ORTHO05D001268 2.1e-07 60.1 119 38.7
Manes.14G138600 Manihot esculenta HOM05D001431 ORTHO05D001268 2.1e-07 60.1 108 38.0
Sed0026439 Sechium edule HOM05D001431 ORTHO05D001268 4.6e-07 58.9 101 40.6
MELO3C010262.2 Cucumis melo HOM05D001431 ORTHO05D001268 6.0e-07 58.5 94 42.6
Duzib168G0421 Durio zibethinus HOM05D001431 ORTHO05D001268 6.0e-07 58.5 91 44.0
EL10Ac8g18816 Beta vulgaris HOM05D001431 ORTHO05D001268 7.8e-07 58.2 66 47.0
Nn8g39717 Nelumbo nucifera HOM05D001431 ORTHO05D001268 7.8e-07 58.2 88 45.5
ECA240G3019 Erigeron canadensis HOM05D001431 ORTHO05D001268 1.0e-06 57.8 115 34.8
Actinidia26350 Actinidia chinensis HOM05D000320 ORTHO05D000532 1.3e-06 57.4 68 51.5
Lsat_1_v5_gn_7_47921 Lactuca sativa HOM05D001431 ORTHO05D001268 1.3e-06 57.4 113 36.3
COL.COLO4_24101 Corchorus olitorius HOM05D001431 ORTHO05D001268 1.7e-06 57.0 97 41.2
Duzib187G1758 Durio zibethinus HOM05D001431 ORTHO05D001268 3.0e-06 56.2 68 51.5
Lalb_Chr11g0072871 Lupinus albus HOM05D001431 ORTHO05D001268 3.0e-06 56.2 123 35.8
Ca_21904_v3 Cicer arietinum L. HOM05D001431 ORTHO05D001268 3.9e-06 55.8 85 35.3
Ca_21922_v3 Cicer arietinum L. HOM05D001431 ORTHO05D001268 3.9e-06 55.8 85 35.3
CDE10G0680 Ceratophyllum demersum HOM05D001431 ORTHO05D001268 5.1e-06 55.5 96 38.5
Hma1.2p1_0176F.1_g077720 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 5.1e-06 55.5 87 35.6
Ah.09g223880 Amaranthus hybridus HOM05D001431 ORTHO05D001268 6.6e-06 55.1 66 47.0
AUR62008241 Chenopodium quinoa HOM05D001431 ORTHO05D001268 6.6e-06 55.1 62 46.8
AUR62030993 Chenopodium quinoa HOM05D001431 ORTHO05D001268 6.6e-06 55.1 62 46.8
Eucgr.C02729 Eucalyptus grandis HOM05D001431 ORTHO05D001268 6.6e-06 55.1 109 37.6


User provided reference genes

Program Settings