Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 1.9e-46 189.1 114 100.0
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 6.2e-42 174.1 134 83.6
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 6.2e-42 174.1 134 83.6
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 6.2e-42 174.1 134 70.9
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 6.2e-42 174.1 134 83.6
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 6.2e-42 174.1 134 83.6
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 8.9e-41 170.2 134 80.6
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 8.9e-41 170.2 134 80.6
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 1.2e-40 169.9 134 70.1
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 2.6e-40 168.7 134 79.9
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 3.4e-40 168.3 134 68.7
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 2.9e-39 165.2 134 79.1
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 3.7e-39 164.9 134 67.9
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 3.7e-39 164.9 134 67.9
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 8.3e-39 163.7 134 77.6
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 1.1e-38 163.3 134 67.2
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 1.1e-38 163.3 134 67.2
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 1.9e-38 162.5 107 78.5
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 2.4e-38 162.2 134 79.1
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 2.4e-38 162.2 110 76.4
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 3.2e-38 161.8 134 79.1
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.6e-37 159.5 110 75.5
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 1.6e-37 159.5 110 74.5
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 3.5e-37 158.3 110 74.5
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 1.0e-36 156.8 133 72.2
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 8.6e-36 153.7 106 74.5
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 3.3e-35 151.8 106 74.5
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 5.6e-35 151.0 110 70.0
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 7.3e-35 150.6 134 59.7
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 7.3e-35 150.6 108 71.3
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 2.1e-34 149.1 110 68.2
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 2.1e-34 149.1 110 68.2
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 2.8e-34 148.7 110 69.1
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 4.7e-34 147.9 131 65.6
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 4.7e-34 147.9 104 72.1
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 8.1e-34 147.1 110 67.3
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 8.1e-34 147.1 110 69.1
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 1.1e-33 146.7 103 73.8
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 1.1e-33 146.7 110 68.2
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 1.1e-33 146.7 110 68.2
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 1.4e-33 146.4 110 65.5
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 1.8e-33 146.0 102 74.5
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 1.8e-33 146.0 102 74.5
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 1.8e-33 146.0 110 67.3
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 2.3e-33 145.6 106 70.8
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 3.1e-33 145.2 110 66.4
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 3.1e-33 145.2 102 72.5
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 4.0e-33 144.8 103 72.8
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 5.2e-33 144.4 103 72.8
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 5.2e-33 144.4 103 72.8
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 8.9e-33 143.7 110 66.4
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 1.2e-32 143.3 110 68.2
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 2.0e-32 142.5 110 66.4
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 2.0e-32 142.5 107 68.2
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 2.0e-32 142.5 107 68.2
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 3.4e-32 141.7 105 67.6
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 3.4e-32 141.7 105 67.6
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 4.4e-32 141.4 110 63.6
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 5.8e-32 141.0 110 65.5
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 5.8e-32 141.0 110 61.8
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 7.6e-32 140.6 105 69.5
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 7.6e-32 140.6 110 63.6
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 9.9e-32 140.2 110 64.5
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 9.9e-32 140.2 101 70.3
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 1.7e-31 139.4 108 66.7
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 2.2e-31 139.0 110 63.6
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 2.2e-31 139.0 104 69.2
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 2.2e-31 139.0 104 69.2
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 2.2e-31 139.0 104 69.2
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 2.2e-31 139.0 102 68.6
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 2.9e-31 138.7 104 69.2
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 2.9e-31 138.7 133 66.2
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 2.9e-31 138.7 106 66.0
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 6.4e-31 137.5 134 55.2
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 6.4e-31 137.5 105 67.6
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 6.4e-31 137.5 105 67.6
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 6.4e-31 137.5 134 56.0
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 6.4e-31 137.5 105 63.8
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 8.4e-31 137.1 101 67.3
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 1.1e-30 136.7 101 68.3
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 1.4e-30 136.3 101 68.3
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 1.4e-30 136.3 110 61.8
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 2.4e-30 135.6 110 61.8
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 2.4e-30 135.6 110 60.9
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 3.2e-30 135.2 101 67.3
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 4.1e-30 134.8 101 65.3
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 5.4e-30 134.4 101 65.3
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 7.1e-30 134.0 89 78.7
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 7.1e-30 134.0 89 78.7
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 7.1e-30 134.0 101 67.3
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 7.1e-30 134.0 105 64.8
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 1.2e-29 133.3 110 60.9
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 1.2e-29 133.3 133 53.4
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 1.6e-29 132.9 105 63.8
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 2.1e-29 132.5 89 77.5
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 2.7e-29 132.1 87 100.0
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 2.7e-29 132.1 101 66.3
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 3.5e-29 131.7 102 65.7
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 3.5e-29 131.7 101 67.3
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 3.5e-29 131.7 102 67.6
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 4.6e-29 131.3 109 60.6
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 4.6e-29 131.3 107 61.7
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 4.6e-29 131.3 101 66.3
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 4.6e-29 131.3 102 64.7
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 7.8e-29 130.6 101 64.4
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 7.8e-29 130.6 101 63.4
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 1.0e-28 130.2 102 64.7
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 1.0e-28 130.2 108 62.0
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 1.3e-28 129.8 109 59.6
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 1.7e-28 129.4 101 66.3
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 2.3e-28 129.0 106 60.4
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 3.0e-28 128.6 108 60.2
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 3.0e-28 128.6 110 61.8
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 3.9e-28 128.3 106 60.4
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 3.9e-28 128.3 108 61.1
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 3.9e-28 128.3 106 60.4
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 8.6e-28 127.1 108 62.0
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 1.1e-27 126.7 108 59.3
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 1.1e-27 126.7 102 60.8
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 2.5e-27 125.6 107 59.8
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 3.3e-27 125.2 109 60.6
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 3.3e-27 125.2 105 60.0
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 3.3e-27 125.2 105 60.0
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 7.3e-27 124.0 102 60.8
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 7.3e-27 124.0 105 59.0
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.6e-26 122.9 102 60.8
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.6e-26 122.9 109 60.6
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 2.1e-26 122.5 89 70.8
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 2.1e-26 122.5 100 61.0
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 3.6e-26 121.7 109 57.8
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 3.6e-26 121.7 108 56.5
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 4.7e-26 121.3 102 61.8
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.4e-25 119.8 109 59.6
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 1.8e-25 119.4 65 90.8
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 1.3e-23 113.2 101 62.4
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 2.2e-23 112.5 60 90.0
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 4.9e-23 111.3 107 57.0
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 6.4e-23 110.9 133 46.6
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 3.2e-22 108.6 65 78.5
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 1.2e-21 106.7 109 50.5
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 4.6e-21 104.8 102 53.9
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 2.3e-20 102.4 68 66.2
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 1.5e-19 99.8 69 72.5
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 1.3e-18 96.7 57 77.2
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.1e-17 93.6 112 45.5
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.4e-17 93.2 113 45.1
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 2.0e-16 89.4 100 48.0
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.8e-12 76.3 100 49.0
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.3e-12 75.9 107 37.4
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.3e-12 75.9 107 37.4
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 2.4e-06 55.8 111 30.6


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