Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 3.0e-148 528.5 267 100.0
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 4.4e-147 524.6 267 98.9
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 2.0e-139 499.2 268 94.4
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 2.0e-139 499.2 268 94.4
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 9.7e-139 496.9 267 94.8
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 2.8e-138 495.4 263 94.3
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 2.6e-136 488.8 263 93.2
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 4.7e-125 451.4 271 83.8
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 1.8e-121 439.5 271 82.7
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 9.1e-121 437.2 271 81.9
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 1.4e-116 423.3 273 79.9
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 7.5e-115 417.5 266 79.7
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 2.0e-112 409.5 266 79.7
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 2.9e-106 389.0 266 76.3
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 6.6e-95 351.3 271 68.6
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 5.6e-86 321.6 202 72.8
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 1.8e-84 316.6 261 60.5
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 1.8e-84 316.6 266 62.8
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 2.4e-84 316.2 248 62.5
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 3.1e-84 315.8 258 61.6
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 4.0e-84 315.5 258 60.9
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 5.2e-84 315.1 232 65.1
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 6.8e-84 314.7 203 70.0
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 6.8e-84 314.7 262 62.2
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 6.8e-84 314.7 260 62.3
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 1.2e-83 313.9 255 61.6
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 1.5e-83 313.5 206 71.4
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 1.5e-83 313.5 254 60.2
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 1.5e-83 313.5 214 66.8
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 2.6e-83 312.8 258 61.2
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 2.6e-83 312.8 221 66.1
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 2.6e-83 312.8 243 62.1
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 3.4e-83 312.4 241 61.0
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 3.4e-83 312.4 260 61.2
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 5.8e-83 311.6 190 70.5
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 7.6e-83 311.2 190 71.6
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 7.6e-83 311.2 252 62.7
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 1.7e-82 310.1 226 66.4
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 1.7e-82 310.1 256 62.1
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 2.2e-82 309.7 246 62.2
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 2.2e-82 309.7 246 62.6
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 3.8e-82 308.9 253 62.8
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 4.9e-82 308.5 257 60.7
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 6.4e-82 308.1 262 61.1
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 6.4e-82 308.1 262 61.1
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 8.4e-82 307.8 203 68.0
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.1e-81 307.4 246 61.8
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 1.1e-81 307.4 236 62.3
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 1.4e-81 307.0 225 65.8
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 1.4e-81 307.0 267 58.4
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 1.4e-81 307.0 245 63.3
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 1.4e-81 307.0 267 60.7
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.9e-81 306.6 213 68.5
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 1.9e-81 306.6 268 59.7
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.9e-81 306.6 203 69.5
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 2.4e-81 306.2 184 75.0
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.2e-81 305.8 258 62.0
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 3.2e-81 305.8 191 72.8
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 3.2e-81 305.8 264 58.3
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 4.2e-81 305.4 258 60.1
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 4.2e-81 305.4 194 70.1
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 5.4e-81 305.1 245 60.8
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 9.3e-81 304.3 250 60.8
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 1.2e-80 303.9 262 58.0
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 3.5e-80 302.4 204 68.6
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 4.6e-80 302.0 251 61.0
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 6.0e-80 301.6 184 73.4
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 7.8e-80 301.2 246 61.0
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 1.0e-79 300.8 266 57.5
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 1.7e-79 300.1 260 58.1
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 3.0e-79 299.3 205 66.8
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 3.9e-79 298.9 245 59.6
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 8.7e-79 297.7 238 60.9
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 8.7e-79 297.7 253 56.5
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 1.1e-78 297.4 257 56.4
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.5e-78 297.0 193 67.4
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 1.9e-78 296.6 268 58.2
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.5e-78 296.2 194 68.0
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 3.3e-78 295.8 250 58.0
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 3.3e-78 295.8 190 71.6
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 7.3e-78 294.7 254 57.5
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 1.3e-77 293.9 189 69.8
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 1.6e-77 293.5 255 59.6
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 2.8e-77 292.7 263 56.7
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 2.8e-77 292.7 266 57.5
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 3.6e-77 292.4 255 59.6
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 6.2e-77 291.6 188 70.7
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 6.2e-77 291.6 223 62.3
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 2.4e-76 289.7 257 57.2
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 6.9e-76 288.1 181 70.2
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 9.0e-76 287.7 188 69.1
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 1.2e-75 287.3 240 58.8
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 1.2e-75 287.3 246 56.9
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.7e-74 283.5 195 64.1
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 2.9e-74 282.7 246 53.7
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 6.4e-74 281.6 238 57.6
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 1.4e-73 280.4 189 67.2
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.9e-72 274.6 238 58.0
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 1.7e-71 273.5 189 66.1
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 3.0e-71 272.7 189 65.6
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 5.1e-71 271.9 279 54.5
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 1.1e-70 270.8 252 57.1
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 1.9e-70 270.0 276 53.3
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 3.6e-69 265.8 157 73.9
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 1.8e-68 263.5 252 54.0
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.4e-68 263.1 155 74.8
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 5.3e-68 261.9 243 55.6
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 3.4e-67 259.2 187 63.1
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.4e-67 259.2 260 54.2
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 7.6e-67 258.1 253 54.2
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 6.4e-66 255.0 159 69.8
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 1.9e-65 253.4 156 70.5
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 2.4e-65 253.1 208 58.7
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 7.1e-65 251.5 168 69.6
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 2.1e-64 250.0 194 62.9
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 6.7e-63 245.0 248 50.8
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 1.6e-61 240.4 263 51.0
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 2.0e-59 233.4 231 46.8
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 1.1e-57 227.6 262 48.9
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 1.8e-55 220.3 221 51.6
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 8.2e-53 211.5 141 69.5
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 1.4e-52 210.7 152 65.8
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 1.6e-48 197.2 251 41.4
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 1.1e-46 191.0 125 69.6
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.5e-41 173.3 166 54.2
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 1.5e-38 164.1 98 72.4
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.7e-37 159.5 98 68.4
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.8e-36 157.1 103 64.1
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.5e-30 137.5 120 58.3
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 1.1e-28 131.3 98 66.3
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 5.9e-27 125.6 101 62.4
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.6e-24 117.5 188 36.7
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 4.7e-24 115.9 167 40.1
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.3e-23 113.6 98 55.1
Nitab4.5_0000848g0140 Nicotiana tabacum HOM05D007024 ORTHO05D008865 1.1e-22 111.3 199 34.7
Nitab4.5_0010883g0010 Nicotiana tabacum HOM05D007024 ORTHO05D008865 9.7e-22 108.2 185 35.1
Sopen09g002060 Solanum pennellii HOM05D007024 ORTHO05D008865 3.7e-21 106.3 199 34.7
Aqoxy4G03151 Aquilegia oxysepala HOM05D007024 ORTHO05D008865 2.4e-20 103.6 200 33.0
CAN.G350.48 Capsicum annuum HOM05D007024 ORTHO05D008865 2.4e-20 103.6 238 33.2
PSO063G4670 Papaver somniferum HOM05D007024 ORTHO05D008865 2.4e-20 103.6 192 33.3
Oeu029107.1 Olea europaea HOM05D007024 ORTHO05D008865 3.1e-20 103.2 224 32.6
Sc20g0004190 Simmondsia chinensis HOM05D007024 ORTHO05D008865 3.1e-20 103.2 199 33.7
Solyc09g007190.3 Solanum lycopersicum HOM05D007024 ORTHO05D008865 5.3e-20 102.4 186 34.4
Peaxi162Scf01517g00138 Petunia axillaris HOM05D007024 ORTHO05D008865 9.1e-20 101.7 187 34.8
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 1.2e-19 101.3 68 72.1
vmacro08688 Vaccinium macrocarpon HOM05D007024 ORTHO05D008865 3.5e-19 99.8 201 31.8
MBI18_g34970_MAGBIO Magnolia biondii HOM05D007024 ORTHO05D008865 4.5e-19 99.4 178 33.7
PSO782G5617 Papaver somniferum HOM05D007024 ORTHO05D008865 4.5e-19 99.4 192 32.3
Sp4g19560 Schrenkiella parvula HOM05D007024 ORTHO05D008865 2.2e-18 97.1 256 29.7
CSS0004845 Camellia sinensis var. sinensis HOM05D007024 ORTHO05D008865 2.9e-18 96.7 187 33.2
SMO353G0397 Selaginella moellendorffii HOM05D007024 ORTHO05D008865 3.8e-18 96.3 176 34.7
Os03g0284600 Oryza sativa ssp. japonica HOM05D007024 ORTHO05D008865 5.0e-18 95.9 259 31.3
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 8.5e-18 95.1 132 43.2
Zm00001eb013030 Zea mays HOM05D007024 ORTHO05D008865 1.9e-17 94.0 201 31.8
unitig_746.g26783 Utricularia gibba HOM05D007024 ORTHO05D008865 2.5e-17 93.6 180 32.2
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 3.2e-17 93.2 103 52.4
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 1.0e-15 88.2 53 75.5
PGSC0003DMG400027897 Solanum tuberosum HOM05D007024 ORTHO05D008865 4.0e-15 86.3 140 39.3
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 4.4e-14 82.8 128 35.9
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 9.8e-14 81.6 54 72.2
Actinidia05279 Actinidia chinensis HOM05D007024 ORTHO05D008865 6.3e-13 79.0 154 33.1
Mapoly0154s0013 Marchantia polymorpha HOM05D007024 ORTHO05D008865 8.3e-13 78.6 269 31.6
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 4.1e-12 76.3 131 34.4
Hund12062 Selenicereus undatus HOM05D007024 ORTHO05D008865 5.4e-12 75.9 234 28.2
CDE04G0730 Ceratophyllum demersum HOM05D007024 ORTHO05D008865 9.1e-12 75.1 246 27.6
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 8.5e-10 68.6 135 33.3
CBR_g9017 Chara braunii HOM05D001161 ORTHO05D000497 1.1e-09 68.2 123 30.1
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 2.5e-09 67.0 142 34.5
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 5.5e-09 65.9 110 35.5
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 9.4e-09 65.1 135 35.6
SGA_v2.0_scaffold94G28656 Striga asiatica HOM05D007024 ORTHO05D008865 1.2e-08 64.7 209 28.7
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 2.7e-08 63.5 50 68.0
Gohir.A12G080465 Gossypium hirsutum HOM05D004917 ORTHO05D005954 6.1e-08 62.4 100 36.0
ATR0739G073 Amborella trichopoda HOM05D004917 ORTHO05D005954 4.4e-06 56.2 94 37.2


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