Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 8.5e-249 863.2 441 100.0
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 8.5e-249 863.2 441 100.0
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 2.2e-244 848.6 441 98.9
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 5.9e-242 840.5 441 97.3
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 2.9e-241 838.2 441 97.3
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 4.1e-235 817.8 442 95.5
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 4.4e-221 771.2 449 89.5
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 1.7e-217 759.2 445 88.5
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 9.5e-216 753.4 445 87.4
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 2.8e-215 751.9 448 87.7
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 4.0e-214 748.0 443 87.4
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 5.8e-213 744.2 448 86.6
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 1.7e-196 689.5 446 80.5
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 7.1e-195 684.1 443 80.1
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 6.0e-194 681.0 449 78.4
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 5.6e-192 674.5 456 76.3
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 7.3e-192 674.1 450 76.2
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 9.6e-192 673.7 419 80.4
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 4.8e-191 671.4 439 78.4
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 4.8e-191 671.4 439 78.4
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 1.8e-190 669.5 400 83.8
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 1.8e-190 669.5 400 84.0
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 5.3e-190 667.9 457 75.9
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.2e-189 666.8 374 87.2
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 2.6e-189 665.6 456 76.3
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 3.4e-189 665.2 455 76.3
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 4.5e-189 664.8 452 74.8
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 1.3e-188 663.3 406 80.8
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 2.2e-188 662.5 423 79.2
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 2.2e-188 662.5 390 84.6
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 2.2e-188 662.5 453 75.5
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 2.9e-188 662.1 441 77.8
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 3.8e-188 661.8 400 83.0
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 6.4e-188 661.0 446 76.5
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 8.4e-188 660.6 454 75.1
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 1.1e-187 660.2 443 76.1
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.9e-187 659.4 448 76.3
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 2.4e-187 659.1 443 75.8
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 2.4e-187 659.1 443 76.5
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 4.2e-187 658.3 443 76.3
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 5.4e-187 657.9 411 80.0
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 5.4e-187 657.9 408 80.6
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 9.3e-187 657.1 446 75.1
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 1.6e-186 656.4 381 85.3
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 1.6e-186 656.4 409 80.0
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 2.7e-186 655.6 445 75.3
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 2.7e-186 655.6 449 75.1
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 3.5e-186 655.2 439 77.0
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 4.6e-186 654.8 445 75.5
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 4.6e-186 654.8 403 80.6
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 6.0e-186 654.4 443 76.3
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 7.9e-186 654.1 404 80.7
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 7.9e-186 654.1 440 76.4
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 7.9e-186 654.1 409 79.5
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 1.0e-185 653.7 442 77.6
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 1.0e-185 653.7 440 76.4
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 1.3e-185 653.3 446 74.9
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 1.3e-185 653.3 414 79.2
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 1.8e-185 652.9 424 78.1
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.8e-185 652.9 447 75.8
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 1.8e-185 652.9 453 74.2
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 2.3e-185 652.5 449 75.9
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 3.0e-185 652.1 437 77.3
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 3.9e-185 651.7 442 75.6
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 5.1e-185 651.4 426 78.6
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 6.7e-185 651.0 436 76.8
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 1.1e-184 650.2 447 75.6
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 1.5e-184 649.8 452 75.2
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 1.5e-184 649.8 447 76.1
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 1.5e-184 649.8 444 75.9
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 1.9e-184 649.4 458 72.5
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 1.9e-184 649.4 436 76.8
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 1.9e-184 649.4 448 75.4
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 2.5e-184 649.0 447 75.8
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 4.3e-184 648.3 408 80.6
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 5.6e-184 647.9 451 74.9
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 5.6e-184 647.9 389 83.0
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 9.6e-184 647.1 409 79.0
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 9.6e-184 647.1 445 74.8
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 1.3e-183 646.7 439 74.9
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 1.6e-183 646.4 434 76.0
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 1.6e-183 646.4 449 75.1
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 1.6e-183 646.4 389 82.0
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 1.8e-182 642.9 408 80.1
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 4.0e-182 641.7 449 73.7
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 5.3e-182 641.3 458 73.1
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 9.0e-182 640.6 421 76.7
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 1.2e-181 640.2 449 74.6
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 9.9e-181 637.1 424 76.9
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 1.7e-180 636.3 457 72.6
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 2.9e-180 635.6 449 73.7
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 3.8e-180 635.2 385 80.5
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 8.4e-180 634.0 401 79.6
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.1e-179 633.6 366 85.8
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 4.2e-179 631.7 381 82.2
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 6.0e-178 627.9 453 70.6
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 5.1e-177 624.8 507 66.1
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 1.5e-176 623.2 446 73.3
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 9.0e-174 614.0 388 79.4
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 7.6e-173 610.9 385 77.4
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 8.4e-172 607.4 385 77.1
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 9.3e-171 604.0 448 69.4
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 1.1e-166 590.5 328 88.1
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 2.0e-165 586.3 385 73.8
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 6.5e-164 581.3 385 74.5
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 1.4e-163 580.1 447 69.4
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 6.7e-161 571.2 364 75.5
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 4.5e-157 558.5 361 74.8
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 1.0e-153 547.4 412 70.9
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 5.1e-153 545.0 427 68.1
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 2.0e-152 543.1 415 68.9
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 8.2e-151 537.7 373 69.7
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.2e-146 523.9 287 88.9
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 8.8e-145 517.7 372 68.5
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 5.3e-142 508.4 467 60.2
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 2.5e-139 499.6 287 84.0
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 1.8e-137 493.4 408 60.5
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 3.6e-130 469.2 366 68.0
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 3.6e-130 469.2 363 63.4
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 9.1e-126 454.5 281 81.5
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 1.3e-124 450.7 334 72.5
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 1.2e-117 427.6 233 88.4
SEGI_14262 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.0e-113 414.5 258 77.5
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 7.8e-109 398.3 446 53.1
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 1.1e-107 394.4 301 66.4
SEGI_08539 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 3.5e-93 346.3 224 73.7
CDE02G1558 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 7.1e-86 322.0 256 66.0
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 2.9e-79 300.1 201 70.1
Lsat_1_v5_gn_0_46241 Lactuca sativa HOM05D005052 ORTHO05D006226 1.9e-78 297.4 299 48.5
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 9.0e-73 278.5 273 57.5
RcHm_v2.0_Chr2g0099011 Rosa chinensis HOM05D005052 ORTHO05D006226 1.3e-71 274.6 246 58.9
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 4.2e-70 269.6 161 81.4
Haze_27270 Corylus avellana HOM05D005052 ORTHO05D006226 3.5e-69 266.5 359 43.5
Cfa024476 Carpinus fangiana HOM05D003566 ORTHO05D126353 1.9e-54 217.6 339 41.6
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 7.2e-54 215.7 158 72.2
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 4.2e-46 189.9 147 67.3
Rhsim07G0143100 Rhododendron simsii HOM05D005052 ORTHO05D006226 5.5e-46 189.5 184 58.7
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 6.7e-44 182.6 113 77.0
Ah.03g149140 Amaranthus hybridus HOM05D000441 ORTHO05D000340 1.6e-29 134.8 77 81.8
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 6.7e-28 129.4 83 72.3
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 6.7e-28 129.4 83 72.3
MD02G1126200 Malus domestica HOM05D005052 ORTHO05D006226 2.2e-26 124.4 129 54.3
MD14G1099300 Malus domestica HOM05D005052 ORTHO05D006226 2.2e-26 124.4 129 54.3
Rhsim07G0135500 Rhododendron simsii HOM05D005052 ORTHO05D006226 7.2e-22 109.4 67 77.6
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 4.7e-21 106.7 113 52.2
SEGI_22853 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.8e-20 104.8 69 71.0
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 1.3e-15 88.6 89 57.3
Rhsim07G0135600 Rhododendron simsii HOM05D005052 ORTHO05D339393 1.2e-08 65.5 37 73.0
CSS0040013 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 1.9e-06 58.2 107 41.1


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