Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23090 Brassica carinata HOM05D010884 ORTHO05D012938 3.0e-29 132.5 70 100.0
BolC9t54118H Brassica oleracea HOM05D010884 ORTHO05D012938 3.0e-29 132.5 70 100.0
C09p12240 Brassica napus HOM05D010884 ORTHO05D012938 5.2e-29 131.7 70 98.6
A09p10300 Brassica napus HOM05D010884 ORTHO05D012938 2.0e-28 129.8 70 97.1
BraA09t36675Z Brassica rapa HOM05D010884 ORTHO05D012938 4.4e-28 128.6 70 95.7
BcaB08g34521 Brassica carinata HOM05D010884 ORTHO05D012938 4.2e-23 112.1 71 85.9
BolC3t17853H Brassica oleracea HOM05D010884 ORTHO05D012938 4.2e-23 112.1 71 85.9
BcaC01g03133 Brassica carinata HOM05D010884 ORTHO05D012938 9.4e-23 110.9 71 84.5
C03p55730 Brassica napus HOM05D010884 ORTHO05D012938 9.4e-23 110.9 71 84.5
A03p44850 Brassica napus HOM05D010884 ORTHO05D012938 6.1e-22 108.2 69 85.5
BraA03t13621Z Brassica rapa HOM05D010884 ORTHO05D012938 6.1e-22 108.2 69 85.5
AL3G44860 Arabidopsis lyrata HOM05D010884 ORTHO05D012938 2.8e-19 99.4 72 75.0
AT2G11910 Arabidopsis thaliana HOM05D010884 ORTHO05D012938 6.3e-19 98.2 72 75.0
CARHR105010 Cardamine hirsuta HOM05D010884 ORTHO05D012938 2.4e-18 96.3 71 73.2
Carub.0003s2774 Capsella rubella HOM05D010884 ORTHO05D012938 4.5e-17 92.0 71 71.8
Aa31sc200G30 Aethionema arabicum HOM05D010884 ORTHO05D012938 1.3e-08 63.9 71 53.5
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 3.3e-07 59.3 75 52.0
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 5.6e-07 58.5 33 84.8
THA.LOC104826562 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 8.0e-06 54.7 79 44.3


User provided reference genes

Program Settings