Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23033 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-249 865.1 436 100.0
BcaC05g26989 Brassica carinata HOM05D000496 ORTHO05D000411 7.1e-163 577.8 499 68.1
BcaC01g00534 Brassica carinata HOM05D000020 ORTHO05D000543 4.3e-144 515.4 432 69.9
BcaC02g07871 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-126 456.8 428 65.7
BcaNung02816 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-121 441.0 387 66.9
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-110 404.4 499 52.7
BcaC06g36099 Brassica carinata HOM05D010392 ORTHO05D000411 6.8e-49 199.1 256 54.7
BcaC01g00867 Brassica carinata HOM05D010392 ORTHO05D040019 8.4e-47 192.2 387 39.5
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-37 160.2 393 35.4
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-34 151.8 427 36.3
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 2.1e-26 124.4 445 28.8
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 6.2e-26 122.9 364 32.7
BolC3t20829H Brassica oleracea HOM05D010392 ORTHO05D040019 5.8e-24 116.3 165 47.9
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-22 110.5 389 30.1
BcaC05g28121 Brassica carinata HOM05D000496 ORTHO05D039070 4.6e-21 106.7 379 31.7
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-20 103.6 379 32.2
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 8.7e-20 102.4 359 30.6
BcaC02g10789 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-19 102.1 409 29.8
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-18 98.2 343 28.9
BolC8t48398H Brassica oleracea HOM05D000496 ORTHO05D000411 8.2e-18 95.9 411 28.0
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-17 95.5 357 28.3
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-17 95.5 373 29.2
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-17 95.5 337 30.3
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-17 94.7 369 28.2
BcaB04g17732 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-17 94.0 86 50.0
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-17 93.6 392 27.3
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-17 92.8 64 60.9
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-17 92.8 343 30.6
BcaC06g36471 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-17 92.8 102 47.1
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 1.2e-16 92.0 408 27.2
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-16 91.7 64 60.9
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-16 91.3 66 59.1
BcaC02g08982 Brassica carinata HOM05D017621 ORTHO05D096350 2.6e-16 90.9 147 41.5
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-16 90.5 67 56.7
BcaC02g10795 Brassica carinata HOM05D017621 ORTHO05D000411 3.4e-16 90.5 147 41.5
BcaC02g10796 Brassica carinata HOM05D017621 ORTHO05D091941 3.4e-16 90.5 147 41.5
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-16 89.7 59 66.1
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-16 89.7 376 27.7
BcaC01g02150 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-16 89.4 60 63.3
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-16 89.4 365 28.5
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 1.3e-15 88.6 103 46.6
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-15 88.2 59 62.7
BcaC03g15569 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-15 88.2 100 44.0
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-15 87.8 335 28.7
BcaC09g48800 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-15 87.8 63 55.6
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-15 87.4 83 47.0
BcaC05g27417 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-15 87.4 83 47.0
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-15 87.4 64 56.2
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-15 87.4 63 57.1
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-15 86.7 67 53.7
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-15 85.9 62 58.1
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-15 85.9 355 28.2
BcaC04g21194 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-14 85.5 86 50.0
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-14 85.1 395 28.9
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-14 84.7 67 52.2
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-14 84.7 376 26.6
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-14 84.7 68 50.0
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-14 84.7 66 54.5
BolC2t10251H Brassica oleracea HOM05D000496 ORTHO05D000411 1.9e-14 84.7 66 53.0
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-14 84.0 103 44.7
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-14 83.6 64 56.2
C05p49720 Brassica napus HOM05D000496 ORTHO05D000411 4.2e-14 83.6 63 58.7
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-14 83.2 83 44.6
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-14 83.2 371 27.0
BcaC06g34564 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-14 82.8 59 55.9
BcaC06g35070 Brassica carinata HOM05D000496 ORTHO05D000411 9.3e-14 82.4 62 54.8
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 9.3e-14 82.4 110 43.6
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 9.3e-14 82.4 71 50.7
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-13 82.0 80 47.5
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-13 82.0 203 29.1
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 1.2e-13 82.0 67 52.2
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-13 81.6 145 37.2
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 1.6e-13 81.6 59 55.9
BraA09t39002Z Brassica rapa HOM05D000496 ORTHO05D000411 2.1e-13 81.3 63 55.6
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-13 80.9 376 28.2
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-13 80.9 397 25.4
C09p62330 Brassica napus HOM05D058036 ORTHO05D032289 3.5e-13 80.5 54 59.3
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 4.6e-13 80.1 63 54.0
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 4.6e-13 80.1 63 54.0
BolC6t39184H Brassica oleracea HOM05D000496 ORTHO05D000411 4.6e-13 80.1 60 56.7
BcaB05g23273 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-13 79.3 346 26.9
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-13 79.3 366 28.4
BcaC05g28639 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-13 79.3 73 54.8
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.0e-12 79.0 352 27.8
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 1.3e-12 78.6 380 27.4
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-12 76.6 367 28.1
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 5.1e-12 76.6 59 62.7
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-12 76.3 388 26.8
BcaC03g17066 Brassica carinata HOM05D000496 ORTHO05D032289 6.7e-12 76.3 48 64.6
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-11 75.5 370 25.4
C09p21780 Brassica napus HOM05D000496 ORTHO05D000411 1.5e-11 75.1 52 59.6
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-11 74.3 410 27.1
BcaB06g26352 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-11 74.3 137 34.3
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 2.5e-11 74.3 51 58.8
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-11 73.6 53 56.6
Carub.0004s0523 Capsella rubella HOM05D000496 ORTHO05D000411 4.3e-11 73.6 80 46.2
BcaC06g36146 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-10 72.0 348 26.7
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 2.2e-10 71.2 391 24.8
BcaC05g24355 Brassica carinata HOM05D017621 ORTHO05D000411 2.2e-10 71.2 96 46.9
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.2e-10 71.2 69 42.0
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.2e-10 71.2 69 42.0
Sp7g09260 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.8e-10 70.9 63 50.8
Thhalv10019512m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.7e-10 70.5 61 49.2
Carub.0003s2750 Capsella rubella HOM05D000496 ORTHO05D000411 6.3e-10 69.7 57 52.6
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 8.2e-10 69.3 70 48.6
BcaC04g21355 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-09 68.6 333 27.6
Thhalv10011992m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.8e-09 68.2 61 45.9
Thhalv10005260m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.4e-09 67.8 93 38.7
Carub.0007s3157 Capsella rubella HOM05D000496 ORTHO05D000411 3.1e-09 67.4 330 27.0
Thhalv10012321m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.1e-09 67.4 132 34.8
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 9.0e-09 65.9 129 33.3
BcaB01g02811 Brassica carinata HOM05D010392 ORTHO05D000411 1.5e-08 65.1 230 33.0
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-08 65.1 484 24.8
Thhalv10015514m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.5e-08 65.1 145 29.0
Sp5g17520 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.5e-08 65.1 63 46.0
Carub.0003s2772 Capsella rubella HOM05D000496 ORTHO05D000411 2.0e-08 64.7 169 30.2
CARHR261370 Cardamine hirsuta HOM05D000496 ORTHO05D000411 2.0e-08 64.7 58 50.0
Thhalv10011945m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.0e-08 64.7 60 45.0
Thhalv10015686m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.0e-08 64.7 65 44.6
Thhalv10017779m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.0e-08 64.7 58 46.6
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.4e-08 63.9 60 45.0
BcaC09g50699 Brassica carinata HOM05D010392 ORTHO05D091246 4.5e-08 63.5 101 47.5
Carub.0008s1087 Capsella rubella HOM05D000496 ORTHO05D000411 4.5e-08 63.5 59 45.8
Thhalv10002827m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.5e-08 63.5 394 27.4
Thhalv10022993m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.9e-08 63.2 60 45.0
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.9e-08 63.2 62 43.5
BcaB04g17505 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-08 62.8 69 44.9
BcaC08g44104 Brassica carinata HOM05D010392 ORTHO05D000411 7.7e-08 62.8 101 47.5
BolC7t44304H Brassica oleracea HOM05D000496 ORTHO05D027466 7.7e-08 62.8 46 56.5
Sp7g08130 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.7e-08 62.8 59 49.2
BcaB04g17415 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-07 61.6 61 50.8
Sp2g05200 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.2e-07 61.2 106 34.9
BcaB06g27750 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 60.8 61 49.2
Sp4g04600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.9e-07 60.8 59 47.5
Sp4g07700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.9e-07 60.8 60 48.3
BcaB01g01299 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-07 60.5 79 43.0
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 5.0e-07 60.1 383 25.6
Carub.0007s3143 Capsella rubella HOM05D000496 ORTHO05D000411 6.5e-07 59.7 110 34.5
Thhalv10001142m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.5e-07 59.7 60 45.0
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-07 59.3 127 37.0
Thhalv10026902m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.5e-07 59.3 60 45.0
Sp6g10600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 8.5e-07 59.3 59 45.8
BcaC09g48817 Brassica carinata HOM05D000496 ORTHO05D016100 1.1e-06 58.9 73 39.7
A10p06470 Brassica napus HOM05D000496 ORTHO05D016100 1.1e-06 58.9 73 39.7
C01p45640 Brassica napus HOM05D000496 ORTHO05D016100 1.1e-06 58.9 73 39.7
BolC1t04525H Brassica oleracea HOM05D000496 ORTHO05D016100 1.1e-06 58.9 73 39.7
Sp1g33990 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.1e-06 58.9 133 33.1
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-06 58.5 47 51.1
Carub.0007s3055 Capsella rubella HOM05D000496 ORTHO05D000411 1.4e-06 58.5 315 27.6
Sp1g16530 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.5e-06 57.8 321 27.7
Sp7g07460 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.5e-06 57.8 65 41.5
Sp6g10400 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.2e-06 57.4 54 50.0
Sp6g12660 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.2e-06 57.4 118 33.9
BcaB06g27535 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-06 57.0 55 49.1
Carub.0004s0616 Capsella rubella HOM05D000496 ORTHO05D000411 4.2e-06 57.0 122 34.4
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-06 56.6 391 27.4
BcaC09g49799 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-06 56.6 33 72.7
BcaC09g50999 Brassica carinata HOM05D017621 ORTHO05D000411 7.2e-06 56.2 80 46.2
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 7.2e-06 56.2 56 42.9
BcaC06g35793 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-06 55.8 58 44.8


User provided reference genes

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