Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23032 Brassica carinata HOM05D020738 ORTHO05D031827 2.2e-52 208.8 109 100.0
BolC9t54178H Brassica oleracea HOM05D020738 ORTHO05D031827 1.5e-50 202.6 111 97.3
BraA03t15512Z Brassica rapa HOM05D007009 ORTHO05D031827 2.3e-30 135.6 108 67.6
BcaB08g34581 Brassica carinata HOM05D020738 ORTHO05D008451 2.7e-26 122.1 116 63.8
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 1.9e-16 89.4 138 46.4
BcaB01g02975 Brassica carinata HOM05D020738 ORTHO05D008451 3.6e-15 85.1 109 54.1
BcaC07g38074 Brassica carinata HOM05D020738 ORTHO05D008451 4.0e-14 81.6 90 54.4
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 5.2e-14 81.3 59 71.2
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 1.2e-13 80.1 55 74.5
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 2.9e-12 75.5 61 68.9
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 4.9e-12 74.7 74 58.1
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 2.4e-11 72.4 108 44.4
BcaB03g13693 Brassica carinata HOM05D020738 ORTHO05D090606 3.2e-11 72.0 46 80.4
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 4.6e-10 68.2 126 38.9
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 3.9e-09 65.1 138 39.1
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 4.3e-08 61.6 131 38.9
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 1.1e-06 57.0 103 38.8
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 2.3e-06 55.8 123 35.0
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 5.2e-06 54.7 121 38.0
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 8.9e-06 53.9 111 36.9


User provided reference genes

Program Settings