Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23022 Brassica carinata HOM05D003869 ORTHO05D032479 1.7e-63 245.7 118 100.0
C09p12960 Brassica napus HOM05D003869 ORTHO05D032479 6.2e-53 210.7 181 64.6
BolC9t54188H Brassica oleracea HOM05D003869 ORTHO05D032479 6.2e-53 210.7 181 64.6
BcaB07g31773 Brassica carinata HOM05D003869 ORTHO05D004718 2.9e-42 175.3 178 55.6
Sp3g29520 Schrenkiella parvula HOM05D003869 ORTHO05D004718 4.1e-33 144.8 178 47.8
AL3G52380 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.0e-23 112.1 177 39.0
C09p12950 Brassica napus HOM05D003869 ORTHO05D004718 4.8e-21 104.8 177 37.9
BolC9t54186H Brassica oleracea HOM05D003869 ORTHO05D004718 4.8e-21 104.8 177 37.9
CARHR053960 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.8e-20 102.8 179 40.2
CARHR053970 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.0e-19 99.4 179 37.4
Sp3g29510 Schrenkiella parvula HOM05D003869 ORTHO05D004718 4.5e-19 98.2 168 35.7
BcaC04g23023 Brassica carinata HOM05D003869 ORTHO05D004718 6.4e-18 94.4 161 37.3
A09p10960 Brassica napus HOM05D003869 ORTHO05D004718 5.4e-17 91.3 178 34.3
BraA09t36735Z Brassica rapa HOM05D003869 ORTHO05D004718 5.4e-17 91.3 178 34.3
BcaC04g23026 Brassica carinata HOM05D003869 ORTHO05D004718 3.5e-16 88.6 178 33.7
C09p12930 Brassica napus HOM05D003869 ORTHO05D004718 3.5e-16 88.6 178 33.7
BolC9t54184H Brassica oleracea HOM05D003869 ORTHO05D004718 3.5e-16 88.6 178 33.7
BcaC04g23024 Brassica carinata HOM05D003869 ORTHO05D004718 2.5e-14 82.4 151 36.4
A09p10950 Brassica napus HOM05D003869 ORTHO05D004718 2.8e-13 79.0 174 33.3
Thhalv10023062m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.8e-13 79.0 170 34.1
C09p12940 Brassica napus HOM05D003869 ORTHO05D004718 1.2e-11 73.6 180 32.2
BolC9t54185H Brassica oleracea HOM05D003869 ORTHO05D004718 1.2e-11 73.6 180 32.2
Carub.0131s0002 Capsella rubella HOM05D003869 ORTHO05D004718 3.9e-07 58.5 91 40.7
BcaB07g31774 Brassica carinata HOM05D003869 ORTHO05D004718 6.7e-07 57.8 98 38.8
Sp3g29530 Schrenkiella parvula HOM05D006837 ORTHO05D009407 6.7e-07 57.8 37 67.6
Carub.0003s3004 Capsella rubella HOM05D003869 ORTHO05D004718 1.9e-06 56.2 89 41.6
Carub.0131s0001 Capsella rubella HOM05D003869 ORTHO05D004718 1.9e-06 56.2 89 41.6
Thhalv10000175m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 5.6e-06 54.7 51 41.2
Carub.0003s3002 Capsella rubella HOM05D003869 ORTHO05D004718 7.4e-06 54.3 92 40.2
Carub.0003s3003 Capsella rubella HOM05D003869 ORTHO05D004718 9.6e-06 53.9 48 58.3


User provided reference genes

Program Settings