Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 7.9e-286 986.5 520 100.0
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 8.4e-62 242.3 207 70.5
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 6.7e-59 232.6 228 65.8
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 1.8e-56 224.6 207 69.1
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 2.6e-55 220.7 197 70.1
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 2.2e-54 217.6 182 74.2
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 8.4e-54 215.7 179 74.9
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 7.9e-52 209.1 181 71.8
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 7.9e-52 209.1 181 71.8
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 7.9e-52 209.1 181 71.8
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 2.3e-51 207.6 185 69.2
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 3.4e-47 193.7 191 67.0
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 2.2e-46 191.0 187 67.9
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 8.5e-46 189.1 187 67.4
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 2.5e-45 187.6 187 67.9
BcaB03g14933 Brassica carinata HOM05D007694 ORTHO05D095207 1.3e-43 181.8 190 64.7
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 1.3e-43 181.8 250 55.6
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 1.5e-39 168.3 222 46.4
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.3e-38 165.2 463 33.3
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 5.5e-37 159.8 183 50.8
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 1.0e-35 155.6 102 73.5
BcaC07g37563 Brassica carinata HOM05D007694 ORTHO05D091300 1.3e-33 148.7 177 63.8
BcaNung05554 Brassica carinata HOM05D007694 ORTHO05D019980 6.3e-33 146.4 139 66.2
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 1.1e-32 145.6 184 50.5
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 1.5e-31 141.7 101 67.3
BcaC01g05258 Brassica carinata HOM05D007694 ORTHO05D096253 4.2e-29 133.7 163 63.8
BcaC07g37747 Brassica carinata HOM05D007694 ORTHO05D019980 5.9e-23 113.2 75 78.7
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 3.8e-22 110.5 89 68.5
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 5.0e-22 110.2 134 62.7
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 6.5e-22 109.8 154 53.9
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 8.5e-22 109.4 110 57.3
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 2.5e-21 107.8 89 67.4
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 4.2e-21 107.1 89 67.4
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 4.7e-20 103.6 184 53.3
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 1.0e-19 102.4 229 34.1
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 3.0e-19 100.9 57 86.0
C03p54760 Brassica napus HOM05D000161 ORTHO05D000111 2.0e-18 98.2 51 92.2
BcaC01g01501 Brassica carinata HOM05D007694 ORTHO05D023849 4.4e-18 97.1 83 66.3
BraA02t05833Z Brassica rapa HOM05D012090 ORTHO05D012993 4.4e-18 97.1 71 74.6
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 5.7e-18 96.7 90 54.4
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 5.7e-18 96.7 90 54.4
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 5.7e-18 96.7 90 54.4
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 9.7e-18 95.9 82 57.3
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 1.3e-17 95.5 178 51.7
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 4.8e-17 93.6 63 76.2
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 8.2e-17 92.8 82 56.1
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 8.2e-17 92.8 82 56.1
C04p38540 Brassica napus HOM05D007694 ORTHO05D023849 1.1e-16 92.4 59 81.4
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 1.4e-16 92.0 90 50.0
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 3.1e-16 90.9 90 50.0
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 9.1e-16 89.4 89 49.4
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 3.5e-15 87.4 89 48.3
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 5.9e-15 86.7 80 57.5
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 5.9e-15 86.7 80 57.5
BolC5t31798H Brassica oleracea HOM05D012090 ORTHO05D016799 5.9e-15 86.7 97 57.7
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 7.7e-15 86.3 82 52.4
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 7.7e-15 86.3 82 52.4
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 1.7e-14 85.1 153 37.9
BcaB07g31510 Brassica carinata HOM05D013416 ORTHO05D091801 1.7e-14 85.1 160 39.4
C05p30650 Brassica napus HOM05D012090 ORTHO05D016799 2.9e-14 84.3 73 67.1
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 6.5e-14 83.2 90 47.8
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 6.5e-14 83.2 82 51.2
BcaB08g35488 Brassica carinata HOM05D000163 ORTHO05D000219 1.1e-13 82.4 159 42.1
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 1.1e-13 82.4 90 47.8
BcaC05g27170 Brassica carinata HOM05D012090 ORTHO05D016799 1.5e-13 82.0 92 56.5
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 1.5e-13 82.0 80 55.0
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 1.5e-13 82.0 82 50.0
BcaB03g11572 Brassica carinata HOM05D001412 ORTHO05D002473 1.9e-13 81.6 170 36.5
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 1.9e-13 81.6 80 55.0
BcaB01g04565 Brassica carinata HOM05D008956 ORTHO05D092650 4.2e-13 80.5 167 37.1
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 4.2e-13 80.5 90 47.8
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 5.5e-13 80.1 90 46.7
C07p21690 Brassica napus HOM05D012090 ORTHO05D016799 5.5e-13 80.1 69 65.2
BolC7t42700H Brassica oleracea HOM05D012090 ORTHO05D016799 5.5e-13 80.1 69 65.2
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 7.2e-13 79.7 82 50.0
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 2.7e-12 77.8 87 71.3
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.7e-12 77.8 90 46.7
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 4.7e-12 77.0 90 46.7
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 4.7e-12 77.0 178 48.3
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 6.1e-12 76.6 49 75.5
A02p28260 Brassica napus HOM05D012090 ORTHO05D016799 1.8e-11 75.1 71 60.6
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 1.8e-11 75.1 178 48.9
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 1.8e-11 75.1 52 73.1
BcaC06g34930 Brassica carinata HOM05D012090 ORTHO05D016799 5.2e-11 73.6 58 69.0
BolC4t22383H Brassica oleracea HOM05D013416 ORTHO05D028192 8.8e-11 72.8 160 37.5
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 2.6e-10 71.2 79 48.1
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 2.6e-10 71.2 79 48.1
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 2.6e-10 71.2 79 48.1
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 2.6e-10 71.2 79 48.1
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 2.6e-10 71.2 79 48.1
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 2.6e-10 71.2 79 48.1
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 3.4e-10 70.9 79 48.1
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 3.4e-10 70.9 79 48.1
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 5.7e-10 70.1 79 46.8
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 2.2e-09 68.2 90 45.6
BraA07t31057Z Brassica rapa HOM05D013416 ORTHO05D028192 2.8e-09 67.8 100 42.0
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 6.3e-09 66.6 61 55.7
C08p34070 Brassica napus HOM05D003004 ORTHO05D003860 6.3e-09 66.6 180 33.3
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 8.3e-09 66.2 63 57.1
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 8.3e-09 66.2 61 52.5
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 8.3e-09 66.2 59 59.3
C07p37080 Brassica napus HOM05D013416 ORTHO05D028192 1.1e-08 65.9 149 34.9
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 1.4e-08 65.5 79 44.3
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 1.4e-08 65.5 79 44.3
C07p30550 Brassica napus HOM05D013416 ORTHO05D028192 4.1e-08 63.9 181 30.9
BcaC04g22211 Brassica carinata HOM05D040530 ORTHO05D032573 5.4e-08 63.5 56 62.5
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 1.0e-06 59.3 59 54.2
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.7e-06 58.5 58 51.7
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 2.9e-06 57.8 56 51.8


User provided reference genes

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