Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22844 Brassica carinata HOM05D012065 ORTHO05D014121 1.1e-65 253.1 117 100.0
C01p43090 Brassica napus HOM05D012065 ORTHO05D014121 1.6e-45 186.0 92 93.5
C01p26540 Brassica napus HOM05D012065 ORTHO05D014121 8.0e-45 183.7 92 92.4
C06p03490 Brassica napus HOM05D012065 ORTHO05D014121 1.8e-44 182.6 92 93.5
BcaC08g43090 Brassica carinata HOM05D012065 ORTHO05D014121 4.4e-43 177.9 92 91.3
C05p23270 Brassica napus HOM05D012065 ORTHO05D014121 4.5e-40 167.9 92 87.0
BolC3t18699H Brassica oleracea HOM05D012065 ORTHO05D014121 7.7e-40 167.2 82 93.9
C03p44440 Brassica napus HOM05D012065 ORTHO05D014121 1.9e-38 162.5 92 82.6
A08p08020 Brassica napus HOM05D012065 ORTHO05D014121 1.3e-34 149.8 85 84.7
BcaB06g25897 Brassica carinata HOM05D001053 ORTHO05D007087 1.2e-27 126.7 101 65.3
BolC5t33437H Brassica oleracea HOM05D001053 ORTHO05D007087 9.8e-27 123.6 101 64.4
A04p27420 Brassica napus HOM05D012065 ORTHO05D014121 3.7e-26 121.7 58 89.7
BcaC05g28608 Brassica carinata HOM05D001053 ORTHO05D007087 4.9e-26 121.3 101 63.4
C05p47110 Brassica napus HOM05D001053 ORTHO05D007087 4.9e-26 121.3 101 63.4
A05p31110 Brassica napus HOM05D001053 ORTHO05D007087 4.1e-25 118.2 102 61.8
BraA05t21952Z Brassica rapa HOM05D001053 ORTHO05D007087 4.1e-25 118.2 102 61.8
Thhalv10020421m.g Eutrema salsugineum HOM05D001053 ORTHO05D007087 2.1e-21 105.9 101 60.4
Sp3g16610 Schrenkiella parvula HOM05D001053 ORTHO05D007087 4.7e-21 104.8 101 60.4
AT3G18520 Arabidopsis thaliana HOM05D001053 ORTHO05D007087 3.1e-20 102.1 101 54.5
AL3G31840 Arabidopsis lyrata HOM05D001053 ORTHO05D007087 4.0e-20 101.7 101 55.4
BraSC35t46020Z Brassica rapa HOM05D012065 ORTHO05D014121 5.2e-20 101.3 73 68.5
Carub.0003s1831 Capsella rubella HOM05D001053 ORTHO05D007087 2.7e-16 89.0 101 53.5
CARHR093900 Cardamine hirsuta HOM05D001053 ORTHO05D007087 6.0e-16 87.8 101 54.5
BcaC08g46389 Brassica carinata HOM05D012065 ORTHO05D014121 1.1e-14 83.6 41 92.7
THA.LOC104820404 Tarenaya hassleriana HOM05D001053 ORTHO05D007087 3.3e-14 82.0 105 48.6
Aa31LG8G5390 Aethionema arabicum HOM05D001053 ORTHO05D007087 3.6e-13 78.6 95 51.6
Sabra12G0043500 Salix brachista HOM05D001053 ORTHO05D007087 1.4e-09 66.6 96 40.6
BraSC35t46021Z Brassica rapa HOM05D012065 ORTHO05D014121 7.1e-09 64.3 47 63.8
Gohir.A12G265600 Gossypium hirsutum HOM05D001053 ORTHO05D007087 9.2e-09 63.9 93 39.8
BcaC01g03696 Brassica carinata HOM05D001053 ORTHO05D007087 2.1e-08 62.8 101 41.6
C03p49480 Brassica napus HOM05D001053 ORTHO05D007087 2.1e-08 62.8 101 41.6
BolC3t17246H Brassica oleracea HOM05D001053 ORTHO05D007087 2.1e-08 62.8 101 41.6
FAN08G3403 Fragaria x ananassa HOM05D001053 ORTHO05D007087 6.6e-07 57.8 88 42.0
Lalb_Chr13g0302311 Lupinus albus HOM05D001053 ORTHO05D007087 1.1e-06 57.0 93 38.7
FAN18G3757 Fragaria x ananassa HOM05D001053 ORTHO05D007087 1.9e-06 56.2 88 40.9
Phvul.003G176700 Phaseolus vulgaris HOM05D001053 ORTHO05D007087 1.9e-06 56.2 79 43.0
Lalb_Chr07g0178611 Lupinus albus HOM05D001053 ORTHO05D007087 2.5e-06 55.8 101 35.6
VMungo1215G0938 Vigna mungo HOM05D001053 ORTHO05D007087 2.5e-06 55.8 51 54.9
C02p35920 Brassica napus HOM05D016321 ORTHO05D103495 5.6e-06 54.7 44 61.4
Medtr4g111985 Medicago truncatula HOM05D001053 ORTHO05D007087 5.6e-06 54.7 56 42.9
Eucgr.B00702 Eucalyptus grandis HOM05D001053 ORTHO05D007087 7.3e-06 54.3 75 38.7
arahy.Tifrunner.gnm1.ann1.YD5ENU Arachis hypogaea HOM05D001053 ORTHO05D007087 9.5e-06 53.9 58 44.8


User provided reference genes

Program Settings