Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-148 529.6 321 100.0
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 5.7e-69 265.4 384 47.4
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-43 181.0 335 42.4
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 6.6e-41 172.2 390 37.4
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-38 164.9 373 46.1
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 1.3e-36 157.9 247 47.4
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 2.2e-36 157.1 438 42.2
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 1.0e-33 148.3 291 38.1
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 1.5e-32 144.4 428 30.6
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 9.6e-32 141.7 351 35.0
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 2.1e-31 140.6 416 30.0
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 4.7e-31 139.4 125 65.6
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 4.0e-30 136.3 432 36.1
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-29 134.8 332 36.1
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 2.2e-28 130.6 192 54.2
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 2.9e-28 130.2 205 47.8
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 3.8e-28 129.8 310 37.1
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 8.4e-28 128.6 375 42.9
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 8.4e-28 128.6 360 33.9
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 5.4e-27 125.9 304 34.9
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 2.1e-26 124.0 230 43.5
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 2.1e-26 124.0 230 43.5
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 4.6e-26 122.9 360 33.3
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-25 120.9 248 40.7
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 3.0e-25 120.2 247 42.5
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 2.5e-24 117.1 335 46.9
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 4.8e-23 112.8 314 35.0
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-22 111.7 337 45.1
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-22 111.7 361 32.7
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-22 110.9 255 35.7
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 6.9e-22 109.0 425 30.1
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 2.0e-21 107.5 286 32.9
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 7.6e-21 105.5 372 31.5
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 9.9e-21 105.1 146 47.9
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-20 104.4 248 37.5
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 2.2e-20 104.0 124 54.0
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 4.9e-20 102.8 348 29.6
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 6.4e-20 102.4 335 37.3
BolC9t54428H Brassica oleracea HOM05D004489 ORTHO05D010056 8.4e-20 102.1 53 92.5
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 1.9e-19 100.9 286 32.2
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 2.4e-19 100.5 152 46.1
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 2.4e-19 100.5 62 83.9
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 4.2e-19 99.8 337 30.3
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 7.1e-19 99.0 161 46.0
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 3.5e-18 96.7 372 30.1
C01p12180 Brassica napus HOM05D004489 ORTHO05D000199 3.5e-18 96.7 78 62.8
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 4.6e-18 96.3 253 36.0
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 7.8e-18 95.5 247 36.4
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-17 95.1 153 45.1
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 1.0e-17 95.1 249 36.9
C08p09430 Brassica napus HOM05D004489 ORTHO05D000199 1.0e-17 95.1 77 61.0
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 1.3e-17 94.7 62 79.0
C02p45120 Brassica napus HOM05D004489 ORTHO05D000199 1.3e-17 94.7 78 61.5
C05p42600 Brassica napus HOM05D004489 ORTHO05D000199 3.9e-17 93.2 78 61.5
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 5.1e-17 92.8 128 50.0
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 1.9e-16 90.9 215 38.1
C03p69080 Brassica napus HOM05D004489 ORTHO05D000199 4.3e-16 89.7 78 60.3
C04p33130 Brassica napus HOM05D004489 ORTHO05D024615 4.3e-16 89.7 61 72.1
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 5.6e-16 89.4 253 35.6
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 7.3e-16 89.0 206 38.8
C06p12830 Brassica napus HOM05D001285 ORTHO05D000199 7.3e-16 89.0 45 88.9
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 9.6e-16 88.6 245 45.7
BcaC07g38322 Brassica carinata HOM05D008277 ORTHO05D011446 9.6e-16 88.6 50 76.0
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 2.8e-15 87.0 187 39.0
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-14 85.1 253 35.2
BolC3t18662H Brassica oleracea HOM05D008277 ORTHO05D028234 1.1e-14 85.1 40 82.5
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-14 85.1 253 35.2
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-14 84.7 176 40.9
BcaB02g10530 Brassica carinata HOM05D008277 ORTHO05D011446 1.8e-14 84.3 43 81.4
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 4.0e-14 83.2 254 49.2
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 6.9e-14 82.4 351 28.8
BolC8t47152H Brassica oleracea HOM05D008277 ORTHO05D028234 9.0e-14 82.0 38 84.2
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 1.2e-13 81.6 44 90.9
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 1.2e-13 81.6 44 93.2
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 2.6e-13 80.5 262 46.6
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-13 80.1 233 36.1
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 7.6e-13 79.0 128 37.5
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-12 78.2 259 30.5
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 1.7e-12 77.8 43 72.1
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 1.7e-12 77.8 171 39.2
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 2.2e-12 77.4 292 41.1
BcaC07g38867 Brassica carinata HOM05D008277 ORTHO05D011446 2.9e-12 77.0 41 75.6
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 2.9e-12 77.0 172 36.6
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 3.8e-12 76.6 120 51.7
A01p28050 Brassica napus HOM05D008277 ORTHO05D028234 4.9e-12 76.3 37 81.1
BcaC05g27188 Brassica carinata HOM05D008277 ORTHO05D011446 6.4e-12 75.9 40 75.0
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 6.4e-12 75.9 253 45.5
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 1.4e-11 74.7 138 41.3
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 1.9e-11 74.3 293 43.7
A03p67720 Brassica napus HOM05D008277 ORTHO05D011446 3.2e-11 73.6 39 71.8
BolC9t57004H Brassica oleracea HOM05D004489 ORTHO05D024615 3.2e-11 73.6 49 73.5
BraA01t02693Z Brassica rapa HOM05D008277 ORTHO05D011446 3.2e-11 73.6 39 71.8
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 4.2e-11 73.2 214 35.0
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 4.2e-11 73.2 292 41.1
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 5.4e-11 72.8 207 35.3
A05p29650 Brassica napus HOM05D008277 ORTHO05D011446 1.6e-10 71.2 39 69.2
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 1.6e-10 71.2 207 51.7
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 2.1e-10 70.9 294 43.9
A04p09680 Brassica napus HOM05D008277 ORTHO05D011446 2.7e-10 70.5 39 69.2
BraA04t16626Z Brassica rapa HOM05D008277 ORTHO05D011446 2.7e-10 70.5 39 69.2
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 2.7e-10 70.5 86 54.7
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 3.5e-10 70.1 207 52.7
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 4.6e-10 69.7 149 38.9
A01p27640 Brassica napus HOM05D008277 ORTHO05D011446 4.6e-10 69.7 39 69.2
A03p66470 Brassica napus HOM05D008277 ORTHO05D011446 4.6e-10 69.7 39 69.2
BNapus_Darmor_BZH_scaffold_103p00040 Brassica napus HOM05D008277 ORTHO05D011446 4.6e-10 69.7 39 69.2
BNapus_Darmor_BZH_scaffold_104p00040 Brassica napus HOM05D008277 ORTHO05D011446 4.6e-10 69.7 39 69.2
C04p13480 Brassica napus HOM05D008277 ORTHO05D011446 4.6e-10 69.7 39 69.2
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 4.6e-10 69.7 170 38.2
BraA01t02902Z Brassica rapa HOM05D008277 ORTHO05D011446 4.6e-10 69.7 39 69.2
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 6.0e-10 69.3 65 61.5
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 7.9e-10 68.9 137 42.3
BolC9t54985H Brassica oleracea HOM05D004489 ORTHO05D024615 7.9e-10 68.9 48 70.8
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-09 68.6 150 39.3
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-09 67.8 107 46.7
C09p20880 Brassica napus HOM05D004489 ORTHO05D024615 2.3e-09 67.4 48 68.8
BraA03t15298Z Brassica rapa HOM05D008277 ORTHO05D028234 3.0e-09 67.0 39 66.7
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 3.9e-09 66.6 117 44.4
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 6.7e-09 65.9 277 30.3
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 8.7e-09 65.5 125 44.0
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-08 65.1 115 45.2
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 1.5e-08 64.7 182 34.1
BraA05t21322Z Brassica rapa HOM05D008277 ORTHO05D011446 1.9e-08 64.3 38 65.8
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 2.5e-08 63.9 72 54.2
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-08 63.9 222 32.9
BraA05t21163Z Brassica rapa HOM05D010967 ORTHO05D108496 2.5e-08 63.9 76 55.3
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 3.3e-08 63.5 65 56.9
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 3.3e-08 63.5 117 43.6
A05p23080 Brassica napus HOM05D010967 ORTHO05D017683 4.3e-08 63.2 67 59.7
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 5.6e-08 62.8 77 51.9
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 9.6e-08 62.0 117 44.4
A01p19980 Brassica napus HOM05D010967 ORTHO05D017683 1.3e-07 61.6 67 58.2
A09p35600 Brassica napus HOM05D010967 ORTHO05D017683 1.3e-07 61.6 67 58.2
BraA01t02827Z Brassica rapa HOM05D010967 ORTHO05D017683 1.3e-07 61.6 67 58.2
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 1.3e-07 61.6 132 40.2
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 2.1e-07 60.8 65 53.8
A01p34440 Brassica napus HOM05D010967 ORTHO05D017683 2.8e-07 60.5 67 58.2
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 2.8e-07 60.5 67 58.2
A05p17100 Brassica napus HOM05D010967 ORTHO05D017683 2.8e-07 60.5 67 58.2
A09p48280 Brassica napus HOM05D010967 ORTHO05D017683 2.8e-07 60.5 67 58.2
BraA02t08312Z Brassica rapa HOM05D010967 ORTHO05D108770 2.8e-07 60.5 67 58.2
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 2.8e-07 60.5 155 35.5
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 3.7e-07 60.1 122 41.0
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 3.7e-07 60.1 117 41.9
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 6.2e-07 59.3 112 42.0
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 6.2e-07 59.3 117 41.9
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 6.2e-07 59.3 291 41.9
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 8.1e-07 58.9 117 42.7
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-06 58.2 93 46.2
A06p28060 Brassica napus HOM05D010967 ORTHO05D017683 1.4e-06 58.2 63 58.7
A07p07190 Brassica napus HOM05D010967 ORTHO05D099114 1.4e-06 58.2 29 79.3
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.4e-06 58.2 262 30.5
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.4e-06 58.2 262 30.5
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 1.8e-06 57.8 35 77.1
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 3.1e-06 57.0 209 32.5
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 3.1e-06 57.0 117 41.9
A03p58810 Brassica napus HOM05D010967 ORTHO05D017683 9.0e-06 55.5 62 56.5


User provided reference genes

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