Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 5.7e-71 270.8 135 100.0
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 4.4e-55 218.0 135 84.4
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 9.8e-55 216.9 135 83.7
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 1.3e-54 216.5 135 83.7
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 1.3e-54 216.5 135 83.7
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 2.2e-54 215.7 135 83.7
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 4.9e-54 214.5 135 83.0
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 4.9e-54 214.5 135 83.0
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 4.9e-54 214.5 135 83.0
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 1.4e-53 213.0 135 82.2
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 1.4e-53 213.0 135 82.2
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 1.4e-53 213.0 135 82.2
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 7.0e-53 210.7 133 82.0
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 7.0e-53 210.7 135 81.5
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 3.5e-52 208.4 135 79.3
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 1.0e-51 206.8 135 79.3
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 6.6e-51 204.1 135 77.8
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 5.6e-50 201.1 135 77.0
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 4.9e-46 188.0 135 70.4
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 1.1e-45 186.8 133 72.2
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 1.4e-45 186.4 135 68.9
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 1.4e-45 186.4 135 68.9
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 1.9e-45 186.0 135 68.9
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 2.4e-45 185.7 135 71.1
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 3.2e-45 185.3 135 68.1
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 9.2e-45 183.7 134 70.9
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 1.6e-44 183.0 135 69.6
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 1.6e-44 183.0 135 68.1
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 3.5e-44 181.8 135 68.1
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 4.6e-44 181.4 135 68.9
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 4.6e-44 181.4 135 68.9
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 7.8e-44 180.6 135 68.9
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 7.8e-44 180.6 135 68.1
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 7.8e-44 180.6 133 67.7
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 1.3e-43 179.9 135 66.7
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 2.3e-43 179.1 133 66.9
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 2.3e-43 179.1 135 66.7
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 2.3e-43 179.1 133 67.7
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 3.0e-43 178.7 132 69.7
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 3.9e-43 178.3 132 65.9
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 5.1e-43 177.9 135 67.4
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 5.1e-43 177.9 133 66.9
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 8.6e-43 177.2 132 68.9
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 1.1e-42 176.8 130 67.7
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.5e-42 176.4 135 67.4
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 3.3e-42 175.3 130 66.9
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 4.3e-42 174.9 136 65.4
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 5.6e-42 174.5 132 68.2
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 9.5e-42 173.7 131 67.2
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 1.2e-41 173.3 129 67.4
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 1.2e-41 173.3 135 63.7
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 1.2e-41 173.3 130 67.7
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 1.6e-41 172.9 132 67.4
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 1.6e-41 172.9 132 65.9
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 3.6e-41 171.8 130 66.2
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 3.6e-41 171.8 132 66.7
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 3.6e-41 171.8 130 64.6
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 1.1e-40 170.2 135 64.4
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 1.1e-40 170.2 132 65.9
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 1.1e-40 170.2 132 65.9
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 1.4e-40 169.9 131 64.1
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 1.4e-40 169.9 132 65.9
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 1.4e-40 169.9 132 65.9
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 1.4e-40 169.9 132 65.9
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 1.8e-40 169.5 130 66.9
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 1.8e-40 169.5 132 64.4
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 1.8e-40 169.5 130 66.2
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 2.3e-40 169.1 132 66.7
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 2.3e-40 169.1 130 63.8
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 3.1e-40 168.7 132 64.4
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 3.1e-40 168.7 132 64.4
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 3.1e-40 168.7 132 64.4
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 3.1e-40 168.7 132 64.4
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 4.0e-40 168.3 132 65.9
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 5.2e-40 167.9 132 66.7
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 5.2e-40 167.9 130 64.6
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 5.2e-40 167.9 132 63.6
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 6.8e-40 167.5 132 62.9
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 6.8e-40 167.5 131 63.4
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 6.8e-40 167.5 135 64.4
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 6.8e-40 167.5 135 60.7
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 6.8e-40 167.5 135 60.7
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 6.8e-40 167.5 135 60.7
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 6.8e-40 167.5 135 60.7
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 6.8e-40 167.5 135 60.7
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 8.9e-40 167.2 135 63.7
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 8.9e-40 167.2 132 64.4
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 1.2e-39 166.8 132 62.1
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.2e-39 166.8 135 61.5
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 1.5e-39 166.4 130 66.2
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 2.0e-39 166.0 131 64.9
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 2.0e-39 166.0 133 62.4
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 2.0e-39 166.0 133 62.4
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 2.0e-39 166.0 135 60.0
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 2.6e-39 165.6 135 61.5
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 2.6e-39 165.6 131 62.6
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 2.6e-39 165.6 130 64.6
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 3.4e-39 165.2 131 63.4
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 3.4e-39 165.2 135 60.0
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 4.4e-39 164.9 135 64.4
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 5.8e-39 164.5 142 61.3
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 7.6e-39 164.1 135 61.5
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 1.3e-38 163.3 131 63.4
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 1.3e-38 163.3 134 58.2
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 3.8e-38 161.8 135 60.7
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 6.4e-38 161.0 138 62.3
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 2.4e-37 159.1 103 74.8
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 2.4e-37 159.1 103 74.8
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 4.1e-37 158.3 145 57.2
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 7.1e-37 157.5 135 58.5
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 1.6e-36 156.4 98 77.6
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 2.7e-36 155.6 100 77.0
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 6.0e-36 154.5 134 59.7
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 1.0e-35 153.7 135 57.0
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 2.3e-35 152.5 132 57.6
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.0e-35 152.1 98 73.5
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 3.0e-35 152.1 133 56.4
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 6.6e-35 151.0 135 56.3
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 6.6e-35 151.0 135 56.3
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 5.6e-34 147.9 101 70.3
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 7.3e-34 147.5 131 59.5
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 1.2e-33 146.7 132 59.1
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 6.2e-33 144.4 133 56.4
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 1.1e-32 143.7 132 56.8
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 1.4e-32 143.3 119 62.2
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 2.4e-32 142.5 100 72.0
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 2.4e-32 142.5 181 45.3
Ah.07g196880 Amaranthus hybridus HOM05D001461 ORTHO05D005534 6.4e-30 134.4 105 59.0
Hund27230 Selenicereus undatus HOM05D001461 ORTHO05D005534 8.4e-30 134.0 102 66.7
HPP92_002836 Vanilla planifolia HOM05D001461 ORTHO05D005534 1.4e-29 133.3 97 63.9
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 4.2e-29 131.7 108 63.0
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 7.1e-29 131.0 113 59.3
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 8.7e-27 124.0 128 49.2
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 4.3e-26 121.7 131 49.6
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 2.4e-24 115.9 131 44.3
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 3.1e-24 115.5 134 47.8
QL02p032078 Quercus lobata HOM05D001461 ORTHO05D005534 1.6e-20 103.2 54 88.9
MD14G1117200 Malus domestica HOM05D001461 ORTHO05D005534 2.1e-20 102.8 53 90.6
Zm00001eb376320 Zea mays HOM05D001461 ORTHO05D005534 3.5e-20 102.1 138 42.8
Cfa012281 Carpinus fangiana HOM05D001461 ORTHO05D005534 1.3e-19 100.1 53 86.8
MD08G1130100 Malus domestica HOM05D001461 ORTHO05D005534 1.8e-19 99.8 160 39.4
arahy.Tifrunner.gnm1.ann1.2LVS12 Arachis hypogaea HOM05D001461 ORTHO05D005534 1.3e-17 93.6 52 82.7
Actinidia28489 Actinidia chinensis HOM05D001461 ORTHO05D005534 3.1e-16 89.0 52 76.9
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 1.5e-15 86.7 81 58.0
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 2.6e-15 85.9 80 58.8
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 5.8e-15 84.7 81 56.8
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 1.7e-14 83.2 80 57.5
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.8e-14 82.0 81 54.3
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 4.9e-14 81.6 86 53.5
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 5.5e-13 78.2 79 50.6
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 7.1e-13 77.8 73 52.1
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 3.5e-12 75.5 75 52.0
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 6.0e-12 74.7 85 48.2
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 1.0e-11 73.9 71 54.9
Glyma.08G020100 Glycine max HOM05D001461 ORTHO05D005534 1.9e-10 69.7 51 70.6
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 2.5e-10 69.3 71 52.1
MCO07G452 Micromonas commoda HOM05D001461 ORTHO05D005534 4.3e-10 68.6 147 30.6
PRCOL_00003773 Prasinoderma coloniale HOM05D001461 ORTHO05D005534 8.2e-09 64.3 154 31.2
Solyc07g061860.3 Solanum lycopersicum HOM05D001461 ORTHO05D051078 2.4e-08 62.8 72 44.4
Sopen07g030150 Solanum pennellii HOM05D018748 ORTHO05D009630 1.0e-06 57.4 35 77.1
MD08G1129600 Malus domestica HOM05D001461 ORTHO05D005534 1.3e-06 57.0 100 43.0


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