Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22607 Brassica carinata HOM05D000848 ORTHO05D000007 1.3e-67 259.6 128 100.0
C04p14190 Brassica napus HOM05D000848 ORTHO05D000007 1.4e-39 166.4 118 73.7
BcaC03g16079 Brassica carinata HOM05D000848 ORTHO05D000007 3.0e-37 158.7 118 70.3
C02p38390 Brassica napus HOM05D000848 ORTHO05D000007 4.5e-33 144.8 121 64.5
A02p03590 Brassica napus HOM05D000848 ORTHO05D000007 2.2e-32 142.5 118 61.9
BraA05t20915Z Brassica rapa HOM05D000848 ORTHO05D000007 2.2e-32 142.5 118 61.9
BcaC09g48934 Brassica carinata HOM05D000848 ORTHO05D000007 8.5e-32 140.6 118 59.3
BolC1t04404H Brassica oleracea HOM05D000848 ORTHO05D000007 8.5e-32 140.6 118 59.3
BcaC05g26978 Brassica carinata HOM05D000848 ORTHO05D000007 1.2e-30 136.7 114 60.5
BolC7t41672H Brassica oleracea HOM05D000848 ORTHO05D000007 7.9e-30 134.0 118 56.8
BcaC09g49029 Brassica carinata HOM05D000848 ORTHO05D000007 2.3e-29 132.5 118 56.8
A07p03870 Brassica napus HOM05D000848 ORTHO05D000007 2.3e-29 132.5 114 59.6
BcaB03g14750 Brassica carinata HOM05D000848 ORTHO05D000007 3.9e-29 131.7 115 59.1
BcaC03g15443 Brassica carinata HOM05D000848 ORTHO05D000007 1.5e-28 129.8 116 58.6
BolC2t10057H Brassica oleracea HOM05D000848 ORTHO05D000007 2.0e-28 129.4 116 57.8
A04p11890 Brassica napus HOM05D000848 ORTHO05D000007 2.6e-28 129.0 118 55.9
BraA05t21221Z Brassica rapa HOM05D000848 ORTHO05D000007 3.3e-28 128.6 115 57.4
BcaC03g16577 Brassica carinata HOM05D000848 ORTHO05D000007 1.7e-27 126.3 132 51.5
BcaC08g44539 Brassica carinata HOM05D000848 ORTHO05D000007 1.7e-27 126.3 132 51.5
BcaC06g36062 Brassica carinata HOM05D000848 ORTHO05D000007 2.2e-27 125.9 118 55.1
BcaC08g43450 Brassica carinata HOM05D000848 ORTHO05D000007 2.2e-27 125.9 118 55.1
BcaC08g43400 Brassica carinata HOM05D011171 ORTHO05D000007 4.8e-27 124.8 114 56.1
C05p21510 Brassica napus HOM05D000848 ORTHO05D000007 4.8e-27 124.8 118 55.1
BolC5t30846H Brassica oleracea HOM05D000848 ORTHO05D000007 4.8e-27 124.8 118 55.1
BcaC06g35677 Brassica carinata HOM05D000848 ORTHO05D000007 6.3e-27 124.4 114 56.1
BcaC06g36410 Brassica carinata HOM05D000848 ORTHO05D000007 8.2e-27 124.0 115 54.8
BcaC03g16927 Brassica carinata HOM05D000848 ORTHO05D000007 1.1e-26 123.6 114 57.9
BolC2t10860H Brassica oleracea HOM05D000848 ORTHO05D000007 1.1e-26 123.6 114 57.9
BcaC02g08624 Brassica carinata HOM05D000848 ORTHO05D000007 1.4e-26 123.2 109 58.7
BcaC03g16204 Brassica carinata HOM05D000848 ORTHO05D000007 1.4e-26 123.2 116 56.0
BolC2t10005H Brassica oleracea HOM05D000848 ORTHO05D000007 1.4e-26 123.2 116 56.0
BcaC07g38009 Brassica carinata HOM05D000848 ORTHO05D000007 2.4e-26 122.5 118 50.8
BolC5t33750H Brassica oleracea HOM05D000848 ORTHO05D000007 3.1e-26 122.1 114 55.3
BolC9t54850H Brassica oleracea HOM05D000848 ORTHO05D000007 3.1e-26 122.1 114 55.3
BcaC01g02212 Brassica carinata HOM05D000848 ORTHO05D000007 7.0e-26 120.9 118 55.9
C03p67760 Brassica napus HOM05D000848 ORTHO05D000007 7.0e-26 120.9 118 55.9
BolSC21t60238H Brassica oleracea HOM05D000848 ORTHO05D000007 7.0e-26 120.9 118 55.9
BcaB02g11466 Brassica carinata HOM05D000848 ORTHO05D000007 9.1e-26 120.6 109 56.0
BcaC09g49547 Brassica carinata HOM05D000848 ORTHO05D000007 1.2e-25 120.2 116 51.7
BcaC04g22788 Brassica carinata HOM05D000848 ORTHO05D000007 3.5e-25 118.6 116 50.9
BcaC05g26377 Brassica carinata HOM05D000848 ORTHO05D000007 3.5e-25 118.6 114 55.3
BcaC05g27105 Brassica carinata HOM05D000848 ORTHO05D000007 7.7e-25 117.5 72 72.2
BcaB02g10968 Brassica carinata HOM05D000848 ORTHO05D000007 1.0e-24 117.1 116 51.7
Thhalv10029226m.g Eutrema salsugineum HOM05D000848 ORTHO05D000007 3.8e-24 115.2 115 52.2
BolC7t42587H Brassica oleracea HOM05D000848 ORTHO05D000007 6.5e-24 114.4 69 72.5
BcaC01g04799 Brassica carinata HOM05D000848 ORTHO05D000007 1.5e-23 113.2 74 70.3
BolC3t18943H Brassica oleracea HOM05D000848 ORTHO05D000007 1.9e-23 112.8 69 71.0
BolC2t11131H Brassica oleracea HOM05D000848 ORTHO05D000007 3.2e-23 112.1 69 71.0
BolC1t03281H Brassica oleracea HOM05D000848 ORTHO05D000007 7.2e-23 110.9 69 71.0
BraA07t28355Z Brassica rapa HOM05D000848 ORTHO05D000007 7.2e-23 110.9 71 71.8
BcaC04g20484 Brassica carinata HOM05D000848 ORTHO05D000007 9.4e-23 110.5 92 56.5
C05p28360 Brassica napus HOM05D000848 ORTHO05D000007 1.6e-22 109.8 96 58.3
C07p03880 Brassica napus HOM05D000848 ORTHO05D000007 8.0e-22 107.5 100 54.0
Thhalv10000538m.g Eutrema salsugineum HOM05D000848 ORTHO05D000007 1.8e-21 106.3 116 45.7
BolC8t49836H Brassica oleracea HOM05D000848 ORTHO05D000007 2.3e-21 105.9 114 48.2
C03p69600 Brassica napus HOM05D000848 ORTHO05D000007 3.0e-21 105.5 117 50.4
BolC3t19214H Brassica oleracea HOM05D000848 ORTHO05D000007 3.0e-21 105.5 117 50.4
BcaC07g38213 Brassica carinata HOM05D000848 ORTHO05D000007 1.1e-20 103.6 116 46.6
C02p42760 Brassica napus HOM05D020081 ORTHO05D027725 1.5e-20 103.2 69 71.0
Thhalv10015566m.g Eutrema salsugineum HOM05D000848 ORTHO05D000007 2.6e-20 102.4 105 50.5
BcaB07g32940 Brassica carinata HOM05D000848 ORTHO05D000007 3.3e-20 102.1 103 51.5
BolC2t10071H Brassica oleracea HOM05D005297 ORTHO05D000007 9.7e-20 100.5 98 50.0
BcaC01g04174 Brassica carinata HOM05D000848 ORTHO05D000007 2.2e-19 99.4 113 46.0
C03p44250 Brassica napus HOM05D000848 ORTHO05D000007 2.2e-19 99.4 113 46.0
BraA01t02702Z Brassica rapa HOM05D000848 ORTHO05D000007 2.2e-19 99.4 71 66.2
BcaC04g20917 Brassica carinata HOM05D000848 ORTHO05D000007 4.8e-19 98.2 116 46.6
C02p40370 Brassica napus HOM05D000848 ORTHO05D000007 8.2e-19 97.4 94 50.0
BraA08t32737Z Brassica rapa HOM05D000003 ORTHO05D000006 2.4e-18 95.9 69 62.3
BraA02t07668Z Brassica rapa HOM05D000848 ORTHO05D000007 5.3e-18 94.7 114 44.7
BcaC08g42998 Brassica carinata HOM05D000848 ORTHO05D000007 7.0e-18 94.4 72 58.3
BcaC09g50335 Brassica carinata HOM05D000848 ORTHO05D000007 9.1e-18 94.0 72 59.7
C01p35420 Brassica napus HOM05D000848 ORTHO05D000007 1.2e-17 93.6 74 58.1
BolC9t57173H Brassica oleracea HOM05D000848 ORTHO05D000007 1.6e-17 93.2 71 60.6
BcaC01g02020 Brassica carinata HOM05D000848 ORTHO05D000007 3.5e-17 92.0 114 42.1
BolC2t09833H Brassica oleracea HOM05D000848 ORTHO05D000007 3.5e-17 92.0 113 47.8
BcaB01g03203 Brassica carinata HOM05D000848 ORTHO05D000007 4.5e-17 91.7 72 59.7
BcaC01g00305 Brassica carinata HOM05D000848 ORTHO05D000007 7.7e-17 90.9 69 59.4
BolC1t03499H Brassica oleracea HOM05D000848 ORTHO05D000007 1.0e-16 90.5 74 56.8
BcaB06g27088 Brassica carinata HOM05D000848 ORTHO05D000007 2.2e-16 89.4 74 56.8
BcaC08g47172 Brassica carinata HOM05D000848 ORTHO05D000007 3.8e-16 88.6 109 45.0
C02p31230 Brassica napus HOM05D000848 ORTHO05D000007 6.5e-16 87.8 58 70.7
BcaC05g26349 Brassica carinata HOM05D000848 ORTHO05D000007 1.1e-15 87.0 110 41.8
BcaB03g16315 Brassica carinata HOM05D000848 ORTHO05D000007 1.5e-15 86.7 114 44.7
BcaB01g00748 Brassica carinata HOM05D000848 ORTHO05D000007 1.9e-15 86.3 103 44.7
BcaC06g34623 Brassica carinata HOM05D000848 ORTHO05D000007 3.2e-15 85.5 110 41.8
A05p24760 Brassica napus HOM05D000848 ORTHO05D000007 2.1e-14 82.8 107 43.9
BcaC02g10438 Brassica carinata HOM05D000848 ORTHO05D000007 2.7e-14 82.4 71 54.9
BcaB03g16353 Brassica carinata HOM05D000848 ORTHO05D000007 3.6e-14 82.0 71 56.3
Thhalv10012394m.g Eutrema salsugineum HOM05D000848 ORTHO05D000007 1.0e-13 80.5 98 42.9
BolC1t03121H Brassica oleracea HOM05D000848 ORTHO05D000007 1.8e-13 79.7 47 78.7
BcaB07g33752 Brassica carinata HOM05D000848 ORTHO05D000007 8.8e-13 77.4 86 47.7
BraA05t21358Z Brassica rapa HOM05D000848 ORTHO05D000007 1.5e-12 76.6 70 54.3
BcaB05g22525 Brassica carinata HOM05D000848 ORTHO05D000007 1.7e-11 73.2 112 34.8
C03p67230 Brassica napus HOM05D000848 ORTHO05D000007 5.4e-10 68.2 46 67.4
BolC3t19002H Brassica oleracea HOM05D000848 ORTHO05D000007 5.4e-10 68.2 46 67.4
Carub.0008s0661 Capsella rubella HOM05D000848 ORTHO05D000007 5.4e-10 68.2 106 33.0
BolC9t55674H Brassica oleracea HOM05D000848 ORTHO05D000007 1.2e-09 67.0 44 68.2
Carub.0005s1704 Capsella rubella HOM05D000848 ORTHO05D000007 2.0e-09 66.2 117 31.6
BcaC05g27700 Brassica carinata HOM05D025190 ORTHO05D021754 5.9e-09 64.7 108 36.1
BolC5t32502H Brassica oleracea HOM05D000848 ORTHO05D000007 7.7e-09 64.3 50 58.0
BolC7t41076H Brassica oleracea HOM05D000848 ORTHO05D000007 7.7e-09 64.3 52 51.9
BcaC03g15224 Brassica carinata HOM05D000848 ORTHO05D000007 1.3e-08 63.5 95 38.9
BcaC04g21633 Brassica carinata HOM05D000848 ORTHO05D000007 1.3e-08 63.5 81 35.8
BcaC04g23149 Brassica carinata HOM05D000848 ORTHO05D000007 1.3e-08 63.5 81 35.8
C07p06550 Brassica napus HOM05D000848 ORTHO05D000007 2.2e-08 62.8 52 50.0
BolC1t03828H Brassica oleracea HOM05D000848 ORTHO05D000007 5.0e-08 61.6 72 41.7
BcaC05g25603 Brassica carinata HOM05D000848 ORTHO05D000007 2.5e-07 59.3 70 35.7
BolC7t41503H Brassica oleracea HOM05D000848 ORTHO05D000007 3.2e-07 58.9 41 61.0
BcaB02g11179 Brassica carinata HOM05D012167 ORTHO05D000007 1.2e-06 57.0 62 40.3
BolC9t54049H Brassica oleracea HOM05D000848 ORTHO05D000007 1.2e-06 57.0 75 36.0
BcaC04g18816 Brassica carinata HOM05D000003 ORTHO05D032545 1.6e-06 56.6 75 41.3
Carub.0001s3283 Capsella rubella HOM05D000848 ORTHO05D000007 2.1e-06 56.2 114 28.1
Carub.0005s0879 Capsella rubella HOM05D000848 ORTHO05D000007 2.1e-06 56.2 114 28.9
Rhsim03G0037300 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.1e-06 56.2 85 34.1
A03p33310 Brassica napus HOM05D000003 ORTHO05D000007 2.7e-06 55.8 75 40.0
CARHR116840 Cardamine hirsuta HOM05D000848 ORTHO05D000007 2.7e-06 55.8 113 29.2
BcaC03g15381 Brassica carinata HOM05D000848 ORTHO05D000007 3.6e-06 55.5 65 36.9
Carub.0003s3297 Capsella rubella HOM05D000848 ORTHO05D000007 3.6e-06 55.5 116 30.2
Oeu024314.1 Olea europaea HOM05D000003 ORTHO05D000007 3.6e-06 55.5 76 32.9
BolC1t02100H Brassica oleracea HOM05D000848 ORTHO05D000007 4.7e-06 55.1 73 32.9
Carub.0003s3035 Capsella rubella HOM05D000848 ORTHO05D000007 4.7e-06 55.1 75 30.7
Oeu019215.1 Olea europaea HOM05D000003 ORTHO05D000007 4.7e-06 55.1 76 32.9
BolC4t24026H Brassica oleracea HOM05D017061 ORTHO05D000007 6.1e-06 54.7 93 33.3
BcaC05g26008 Brassica carinata HOM05D000003 ORTHO05D000007 8.0e-06 54.3 79 38.0
C08p15060 Brassica napus HOM05D000848 ORTHO05D032182 8.0e-06 54.3 114 28.9
BolC3t18085H Brassica oleracea HOM05D000848 ORTHO05D000007 8.0e-06 54.3 110 31.8
BolC8t49135H Brassica oleracea HOM05D000848 ORTHO05D000007 8.0e-06 54.3 114 28.9
Carub.0001s4487 Capsella rubella HOM05D000848 ORTHO05D000007 8.0e-06 54.3 114 28.1


User provided reference genes

Program Settings