Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22599 Brassica carinata HOM05D000963 ORTHO05D011117 5.1e-37 157.1 75 100.0
C04p22530 Brassica napus HOM05D000963 ORTHO05D011117 4.4e-20 100.9 56 83.9
C09p24690 Brassica napus HOM05D000963 ORTHO05D011117 4.4e-20 100.9 56 83.9
C09p39370 Brassica napus HOM05D000963 ORTHO05D011117 4.4e-20 100.9 56 83.9
BolSC47t61068H Brassica oleracea HOM05D000963 ORTHO05D011117 4.4e-20 100.9 56 83.9
BcaB02g11354 Brassica carinata HOM05D000963 ORTHO05D011117 3.7e-19 97.8 56 82.1
BcaC04g20703 Brassica carinata HOM05D000963 ORTHO05D011117 3.7e-19 97.8 56 82.1
BcaC04g20780 Brassica carinata HOM05D000963 ORTHO05D011117 3.7e-19 97.8 56 82.1
BcaNung07084 Brassica carinata HOM05D000963 ORTHO05D011117 3.7e-19 97.8 56 82.1
BraSC58t46452Z Brassica rapa HOM05D000963 ORTHO05D011117 8.2e-19 96.7 49 93.9
BraSC143t45648Z Brassica rapa HOM05D000963 ORTHO05D011117 2.4e-18 95.1 47 93.6
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 2.2e-16 88.6 45 91.1
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 2.9e-16 88.2 64 70.3
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 1.5e-15 85.9 44 90.9
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.5e-15 85.9 49 79.6
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 9.4e-15 83.2 40 95.0
Cpa.g.sc2719.1 Carica papaya HOM05D000963 ORTHO05D011117 9.4e-15 83.2 41 92.7
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 9.4e-15 83.2 40 95.0
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 9.4e-15 83.2 40 95.0
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.4e-15 83.2 40 95.0
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.4e-15 83.2 40 95.0
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 1.2e-14 82.8 43 86.0
CSS0012622 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D011117 1.6e-14 82.4 42 90.5
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.6e-14 82.4 42 88.1
Sopen06g015040 Solanum pennellii HOM05D000963 ORTHO05D011117 2.1e-14 82.0 40 92.5
unitig_8.g4107 Utricularia gibba HOM05D000963 ORTHO05D011117 2.1e-14 82.0 40 92.5
MELO3C027127.2 Cucumis melo HOM05D000963 ORTHO05D011117 2.7e-14 81.6 39 94.9
MELO3C028157.2 Cucumis melo HOM05D000963 ORTHO05D011117 2.7e-14 81.6 39 94.9
MELO3C033790.2 Cucumis melo HOM05D000963 ORTHO05D011117 2.7e-14 81.6 39 94.9
MELO3C030559.2 Cucumis melo HOM05D000963 ORTHO05D011117 3.0e-13 78.2 39 89.7
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 6.8e-13 77.0 43 86.0
Oeu038562.1 Olea europaea HOM05D000963 ORTHO05D011117 5.7e-12 73.9 40 85.0
MELO3C028252.2 Cucumis melo HOM05D000963 ORTHO05D011117 8.3e-11 70.1 31 100.0
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 1.5e-07 59.3 26 96.2
arahy.Tifrunner.gnm1.ann1.H1VL0A Arachis hypogaea HOM05D000963 ORTHO05D011117 2.5e-07 58.5 51 56.9
Cfa023002 Carpinus fangiana HOM05D000963 ORTHO05D011117 3.2e-07 58.2 29 89.7
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 8.0e-06 53.5 24 95.8


User provided reference genes

Program Settings