Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22568 Brassica carinata HOM05D010600 ORTHO05D007875 6.7e-60 233.8 116 100.0
C09p17810 Brassica napus HOM05D010600 ORTHO05D007875 2.0e-56 222.2 118 97.5
BolC9t54679H Brassica oleracea HOM05D010600 ORTHO05D007875 2.0e-56 222.2 118 97.5
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 3.1e-49 198.4 120 88.3
Sp2g00320 Schrenkiella parvula HOM05D010600 ORTHO05D007875 3.2e-46 188.3 115 84.3
AT1G64405 Arabidopsis thaliana HOM05D010600 ORTHO05D007875 7.9e-45 183.7 122 80.3
AL2G10440 Arabidopsis lyrata HOM05D010600 ORTHO05D007875 2.0e-43 179.1 120 80.0
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 3.7e-42 174.9 120 79.2
BcaB07g31500 Brassica carinata HOM05D010600 ORTHO05D007875 1.4e-38 162.9 120 76.7
Carub.0002s0036 Capsella rubella HOM05D010600 ORTHO05D007875 5.5e-38 161.0 123 73.2
A09p14720 Brassica napus HOM05D010600 ORTHO05D007875 9.4e-38 160.2 119 73.1
BraA09t37118Z Brassica rapa HOM05D010600 ORTHO05D007875 9.4e-38 160.2 119 73.1
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 6.1e-37 157.5 122 74.6
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 6.1e-37 157.5 122 74.6
CARHR046510 Cardamine hirsuta HOM05D010600 ORTHO05D007875 1.0e-36 156.8 120 71.7
BcaC04g22619 Brassica carinata HOM05D010600 ORTHO05D007875 2.3e-36 155.6 120 73.3
C09p17280 Brassica napus HOM05D010600 ORTHO05D007875 3.9e-36 154.8 120 73.3
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 3.9e-36 154.8 120 73.3
Aa31LG2G1420 Aethionema arabicum HOM05D010600 ORTHO05D007875 2.6e-32 142.1 120 69.2
THA.LOC104817601 Tarenaya hassleriana HOM05D010600 ORTHO05D007875 7.0e-25 117.5 116 60.3
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 3.1e-09 65.5 116 39.7
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 5.4e-09 64.7 122 36.9
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 9.1e-09 63.9 117 41.0
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.2e-08 63.5 119 37.8
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 2.0e-08 62.8 115 39.1
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 2.0e-08 62.8 116 37.9
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 3.5e-08 62.0 121 37.2
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 5.9e-08 61.2 116 38.8
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 7.7e-08 60.8 115 35.7
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 1.0e-07 60.5 122 37.7
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 1.3e-07 60.1 117 35.9
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.3e-07 60.1 117 39.3
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 2.3e-07 59.3 121 33.1
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 3.8e-07 58.5 116 38.8
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 6.6e-07 57.8 119 35.3
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 2.5e-06 55.8 116 35.3
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 4.2e-06 55.1 124 33.1
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 4.2e-06 55.1 120 35.8
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 9.5e-06 53.9 114 31.6
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 9.5e-06 53.9 109 37.6
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 9.5e-06 53.9 113 33.6


User provided reference genes

Program Settings