Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 1.6e-61 239.2 119 100.0
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 1.6e-61 239.2 119 100.0
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 1.6e-61 239.2 119 100.0
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 8.1e-61 236.9 119 98.3
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 1.8e-60 235.7 119 97.5
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 1.8e-60 235.7 119 97.5
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 1.8e-60 235.7 119 97.5
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 2.4e-60 235.3 119 97.5
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 5.2e-60 234.2 119 96.6
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 6.8e-60 233.8 119 96.6
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 6.8e-60 233.8 119 96.6
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 2.6e-59 231.9 117 96.6
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 4.4e-59 231.1 119 95.0
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 1.3e-58 229.6 119 93.3
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 3.8e-58 228.0 119 93.3
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 3.8e-58 228.0 119 93.3
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 3.2e-57 224.9 119 92.4
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 7.3e-54 213.8 135 82.2
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 5.3e-52 207.6 119 82.4
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 1.2e-51 206.5 119 81.5
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 1.2e-51 206.5 119 81.5
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 1.5e-51 206.1 117 84.6
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 1.5e-51 206.1 119 81.5
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 2.6e-51 205.3 119 83.2
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 2.6e-51 205.3 119 80.7
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 7.6e-51 203.8 119 82.4
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 9.9e-51 203.4 118 83.1
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 3.8e-50 201.4 117 80.3
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 3.8e-50 201.4 119 79.8
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 4.9e-50 201.1 117 80.3
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 6.4e-50 200.7 119 80.7
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 6.4e-50 200.7 119 80.7
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 8.4e-50 200.3 119 79.0
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 8.4e-50 200.3 119 80.7
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 1.4e-49 199.5 116 81.9
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 1.9e-49 199.1 119 78.2
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.4e-49 198.7 119 79.8
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 3.2e-49 198.4 119 78.2
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 3.2e-49 198.4 117 79.5
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 4.2e-49 198.0 116 81.9
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 4.2e-49 198.0 116 77.6
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 5.4e-49 197.6 114 80.7
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 7.1e-49 197.2 119 79.0
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 7.1e-49 197.2 117 78.6
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 1.6e-48 196.1 114 79.8
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.1e-48 195.7 119 79.0
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 2.7e-48 195.3 116 81.0
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 2.7e-48 195.3 120 77.5
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 3.5e-48 194.9 115 80.0
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 7.9e-48 193.7 114 79.8
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 1.3e-47 193.0 114 79.8
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 1.7e-47 192.6 113 79.6
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 1.7e-47 192.6 119 74.8
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 1.7e-47 192.6 116 77.6
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 2.3e-47 192.2 116 78.4
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 3.0e-47 191.8 114 80.7
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 3.0e-47 191.8 116 78.4
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 6.6e-47 190.7 119 75.6
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 6.6e-47 190.7 116 77.6
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 6.6e-47 190.7 115 77.4
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 6.6e-47 190.7 114 76.3
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 8.7e-47 190.3 116 76.7
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 8.7e-47 190.3 114 78.1
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 8.7e-47 190.3 116 77.6
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 8.7e-47 190.3 116 76.7
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 8.7e-47 190.3 114 76.3
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 8.7e-47 190.3 116 77.6
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 1.1e-46 189.9 116 78.4
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 1.1e-46 189.9 116 78.4
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 1.1e-46 189.9 116 78.4
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 1.5e-46 189.5 114 78.1
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 1.9e-46 189.1 116 75.0
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 2.5e-46 188.7 114 79.8
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 2.5e-46 188.7 119 73.9
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 2.5e-46 188.7 116 75.9
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 2.5e-46 188.7 116 75.9
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 2.5e-46 188.7 116 75.9
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 2.5e-46 188.7 119 76.5
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 3.3e-46 188.3 116 77.6
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 3.3e-46 188.3 119 71.4
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 3.3e-46 188.3 119 71.4
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 3.3e-46 188.3 119 71.4
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 3.3e-46 188.3 119 71.4
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 3.3e-46 188.3 119 71.4
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 5.6e-46 187.6 116 79.3
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 5.6e-46 187.6 119 74.8
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 5.6e-46 187.6 116 78.4
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 5.6e-46 187.6 119 74.8
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 7.3e-46 187.2 116 74.1
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 7.3e-46 187.2 116 75.9
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 9.6e-46 186.8 115 78.3
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 9.6e-46 186.8 119 70.6
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 1.6e-45 186.0 119 70.6
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 2.1e-45 185.7 118 70.3
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 2.8e-45 185.3 119 72.3
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 2.8e-45 185.3 117 73.5
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 2.8e-45 185.3 117 73.5
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 2.8e-45 185.3 126 72.2
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 2.8e-45 185.3 114 76.3
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 3.6e-45 184.9 115 73.9
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 1.1e-44 183.3 119 75.6
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 1.4e-44 183.0 115 74.8
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 1.4e-44 183.0 115 75.7
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 2.4e-44 182.2 119 72.3
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 4.0e-44 181.4 115 75.7
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 9.0e-44 180.3 122 72.1
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 4.5e-43 177.9 119 69.7
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 9.9e-43 176.8 129 65.9
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 1.3e-42 176.4 119 68.1
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 2.2e-42 175.6 118 71.2
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 1.1e-41 173.3 116 69.0
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 4.2e-41 171.4 117 66.7
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 5.4e-41 171.0 119 65.5
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 5.4e-41 171.0 119 65.5
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 1.6e-40 169.5 115 72.2
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 3.0e-39 165.2 116 69.0
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 5.1e-39 164.5 116 68.1
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 1.1e-38 163.3 165 52.1
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 4.3e-38 161.4 101 77.2
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 4.3e-38 161.4 101 77.2
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 1.6e-37 159.5 98 78.6
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.8e-37 158.7 104 73.1
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 2.8e-37 158.7 101 76.2
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 5.3e-36 154.5 117 65.0
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 9.0e-36 153.7 101 73.3
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 4.5e-35 151.4 122 63.9
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 1.0e-34 150.2 97 72.2
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 2.5e-33 145.6 100 73.0
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 7.1e-33 144.1 115 60.9
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 1.6e-32 142.9 112 58.9
HPP92_002836 Vanilla planifolia HOM05D001461 ORTHO05D005534 2.3e-31 139.0 100 66.0
Ah.07g196880 Amaranthus hybridus HOM05D001461 ORTHO05D005534 3.0e-31 138.7 103 62.1
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 6.7e-31 137.5 115 54.8
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 1.1e-30 136.7 118 56.8
Hund27230 Selenicereus undatus HOM05D001461 ORTHO05D005534 2.5e-30 135.6 96 70.8
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 6.9e-28 127.5 98 66.3
Zm00001eb376320 Zea mays HOM05D001461 ORTHO05D005534 4.6e-24 114.8 119 51.3
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 3.7e-21 105.1 64 78.1
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 3.7e-21 105.1 65 75.4
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 6.3e-21 104.4 65 75.4
QL02p032078 Quercus lobata HOM05D001461 ORTHO05D005534 1.8e-20 102.8 54 88.9
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 2.4e-20 102.4 64 76.6
MD14G1117200 Malus domestica HOM05D001461 ORTHO05D005534 2.4e-20 102.4 53 90.6
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.1e-20 102.1 65 72.3
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 4.1e-20 101.7 68 69.1
Cfa012281 Carpinus fangiana HOM05D001461 ORTHO05D005534 1.2e-19 100.1 53 86.8
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 2.6e-19 99.0 57 73.7
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 2.6e-19 99.0 63 68.3
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 1.0e-18 97.1 69 66.7
MD08G1130100 Malus domestica HOM05D001461 ORTHO05D005534 1.0e-18 97.1 160 38.8
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 1.0e-18 97.1 59 72.9
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 3.8e-18 95.1 55 76.4
arahy.Tifrunner.gnm1.ann1.2LVS12 Arachis hypogaea HOM05D001461 ORTHO05D005534 1.1e-17 93.6 52 82.7
Actinidia28489 Actinidia chinensis HOM05D001461 ORTHO05D005534 1.9e-17 92.8 116 45.7
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 2.1e-16 89.4 55 72.7
PRCOL_00003773 Prasinoderma coloniale HOM05D001461 ORTHO05D005534 8.8e-15 84.0 138 37.7
MCO07G452 Micromonas commoda HOM05D001461 ORTHO05D005534 1.1e-14 83.6 131 36.6
Glyma.08G020100 Glycine max HOM05D001461 ORTHO05D005534 1.7e-10 69.7 51 70.6
Solyc07g061860.3 Solanum lycopersicum HOM05D001461 ORTHO05D051078 1.4e-09 66.6 72 47.2
Sopen07g030150 Solanum pennellii HOM05D018748 ORTHO05D009630 3.0e-07 58.9 35 80.0
MD08G1129600 Malus domestica HOM05D001461 ORTHO05D005534 4.4e-06 55.1 99 44.4


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