Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22448 Brassica carinata HOM05D004128 ORTHO05D096019 4.9e-77 292.0 273 100.0
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 3.5e-27 126.3 296 62.5
C09p19220 Brassica napus HOM05D004128 ORTHO05D102580 5.8e-22 109.0 206 58.7
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 5.5e-20 102.4 293 62.5
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 3.5e-19 99.8 121 86.0
C08p39080 Brassica napus HOM05D004128 ORTHO05D018561 3.5e-19 99.8 121 86.0
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-18 97.1 119 82.4
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 3.0e-18 96.7 121 85.1
BcaC04g21799 Brassica carinata HOM05D004128 ORTHO05D018561 6.7e-18 95.5 276 57.6
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 3.1e-15 86.7 181 59.7
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-14 83.6 121 86.8
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 1.3e-10 71.2 269 48.3
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 2.3e-10 70.5 122 73.8
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 3.0e-10 70.1 117 62.4
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 5.1e-10 69.3 122 55.7
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 2.5e-09 67.0 42 78.6
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 2.5e-09 67.0 42 90.5
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 3.3e-09 66.6 246 53.7
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 3.3e-09 66.6 184 53.8
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 5.7e-09 65.9 110 80.9
BcaC07g40907 Brassica carinata HOM05D004128 ORTHO05D008395 3.7e-08 63.2 40 92.5
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 1.4e-07 61.2 348 44.3
BcaC01g00878 Brassica carinata HOM05D004128 ORTHO05D096075 2.4e-07 60.5 79 60.8
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 4.1e-07 59.7 50 88.0
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 4.1e-07 59.7 122 63.1
BcaC08g42938 Brassica carinata HOM05D004128 ORTHO05D091119 9.0e-07 58.5 33 87.9
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 2.6e-06 57.0 123 72.4
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-06 56.6 250 48.8
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 3.4e-06 56.6 250 48.8
A05p08790 Brassica napus HOM05D004128 ORTHO05D103552 4.5e-06 56.2 78 57.7
BolC8t51479H Brassica oleracea HOM05D004128 ORTHO05D041843 5.9e-06 55.8 32 84.4
C01p27650 Brassica napus HOM05D004128 ORTHO05D041843 1.0e-05 55.1 32 84.4


User provided reference genes

Program Settings