Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22402 Brassica carinata HOM05D040257 ORTHO05D032373 3.7e-60 234.6 110 100.0
BolC9t54875H Brassica oleracea HOM05D003839 ORTHO05D019911 2.2e-44 182.2 85 100.0
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-37 159.5 104 67.3
BcaB01g00600 Brassica carinata HOM05D014297 ORTHO05D019911 2.7e-18 95.5 95 47.4
BcaB03g16459 Brassica carinata HOM05D014297 ORTHO05D019911 2.7e-18 95.5 95 47.4
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 6.6e-17 90.9 104 43.3
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 8.7e-17 90.5 45 86.7
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 8.7e-17 90.5 45 86.7
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 8.7e-17 90.5 45 86.7
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 1.9e-16 89.4 45 84.4
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 1.9e-16 89.4 45 84.4
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-15 86.7 45 82.2
C03p49680 Brassica napus HOM05D009411 ORTHO05D014997 1.6e-15 86.3 45 84.4
BolC1t05558H Brassica oleracea HOM05D009411 ORTHO05D014997 1.6e-15 86.3 45 84.4
BolC3t17266H Brassica oleracea HOM05D009411 ORTHO05D014997 1.6e-15 86.3 45 84.4
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-15 85.5 45 80.0
BcaNung06257 Brassica carinata HOM05D014297 ORTHO05D019911 1.2e-13 80.1 70 51.4
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.2e-10 70.1 101 36.6
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.9e-09 65.1 96 35.4
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 5.1e-09 64.7 77 42.9
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 5.1e-09 64.7 78 42.3
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 6.6e-09 64.3 101 35.6
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 6.6e-09 64.3 79 41.8
BolC4t27974H Brassica oleracea HOM05D003839 ORTHO05D003352 1.1e-08 63.5 91 36.3
A04p06120 Brassica napus HOM05D040257 ORTHO05D032373 4.3e-08 61.6 73 46.6
BraA04t16314Z Brassica rapa HOM05D040257 ORTHO05D032373 4.3e-08 61.6 73 46.6
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 9.6e-08 60.5 91 34.1
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-07 60.1 81 35.8
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-07 60.1 91 34.1
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-07 60.1 91 34.1
BolC6t35914H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-07 60.1 92 35.9
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-07 59.7 81 34.6
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-07 59.7 101 30.7
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-07 59.7 101 30.7
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.6e-07 59.7 65 44.6
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-07 59.3 74 41.9
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-07 58.9 101 32.7
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-07 58.9 78 41.0
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-07 58.9 101 32.7
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 2.8e-07 58.9 78 41.0
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 3.6e-07 58.5 81 32.1
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 6.2e-07 57.8 65 44.6
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-06 57.0 81 34.6
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-06 56.6 70 38.6
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-06 56.6 73 35.6
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-06 56.2 81 30.9
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-06 56.2 81 33.3
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-06 56.2 65 43.1
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-06 56.2 65 43.1
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-06 56.2 65 43.1
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-06 55.8 81 34.6
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-06 55.8 70 38.6
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-06 55.8 70 38.6
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-06 55.8 81 35.8
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-06 55.8 70 37.1
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-06 55.1 70 37.1
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 4.0e-06 55.1 93 34.4
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 4.0e-06 55.1 71 33.8
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 4.0e-06 55.1 71 33.8
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 4.0e-06 55.1 86 30.2
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 6.9e-06 54.3 81 33.3
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 6.9e-06 54.3 81 30.9
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 6.9e-06 54.3 81 30.9
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 9.0e-06 53.9 81 32.1
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 9.0e-06 53.9 81 32.1
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 9.0e-06 53.9 81 32.1


User provided reference genes

Program Settings