Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22332 Brassica carinata HOM05D008190 ORTHO05D010344 1.3e-38 162.5 80 100.0
C09p20480 Brassica napus HOM05D008190 ORTHO05D010344 1.3e-38 162.5 80 100.0
BolC9t54953H Brassica oleracea HOM05D008190 ORTHO05D010344 1.3e-38 162.5 80 100.0
BcaC04g22331 Brassica carinata HOM05D008190 ORTHO05D010344 5.0e-38 160.6 80 98.8
C09p20500 Brassica napus HOM05D008190 ORTHO05D010344 5.0e-38 160.6 80 98.8
BolC9t54955H Brassica oleracea HOM05D008190 ORTHO05D010344 5.0e-38 160.6 80 98.8
BcaC04g22333 Brassica carinata HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
BcaC04g22334 Brassica carinata HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
BcaC04g22335 Brassica carinata HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
BcaC04g22336 Brassica carinata HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
BcaC04g22337 Brassica carinata HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
BcaC04g22338 Brassica carinata HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
C09p20450 Brassica napus HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
C09p20460 Brassica napus HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
C09p20470 Brassica napus HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
BolC9t54948H Brassica oleracea HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
BolC9t54950H Brassica oleracea HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
BolC9t54951H Brassica oleracea HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
BolC9t54952H Brassica oleracea HOM05D008190 ORTHO05D010344 1.1e-37 159.5 80 98.8
A09p16740 Brassica napus HOM05D008190 ORTHO05D010344 5.5e-37 157.1 80 96.2
A09p16750 Brassica napus HOM05D008190 ORTHO05D010344 5.5e-37 157.1 80 96.2
BraA09t37311Z Brassica rapa HOM05D008190 ORTHO05D010344 5.5e-37 157.1 80 96.2
BraA09t37312Z Brassica rapa HOM05D008190 ORTHO05D010344 5.5e-37 157.1 80 96.2
C09p20440 Brassica napus HOM05D008190 ORTHO05D010344 7.2e-37 156.8 78 98.7
BolC9t54949H Brassica oleracea HOM05D008190 ORTHO05D010344 4.3e-26 120.9 64 96.9
BcaB04g20339 Brassica carinata HOM05D008190 ORTHO05D010344 6.9e-24 113.6 70 75.7
BcaB04g20340 Brassica carinata HOM05D008190 ORTHO05D010344 6.9e-24 113.6 70 75.7
BcaB04g20342 Brassica carinata HOM05D008190 ORTHO05D010344 6.9e-24 113.6 70 75.7
BcaB04g20338 Brassica carinata HOM05D008190 ORTHO05D010344 3.4e-23 111.3 70 74.3
Sp2g03040 Schrenkiella parvula HOM05D008190 ORTHO05D010344 5.5e-21 104.0 73 69.9
AT1G61566 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 1.6e-20 102.4 74 71.6
C01p38420 Brassica napus HOM05D008190 ORTHO05D010344 2.1e-20 102.1 72 70.8
BolC1t03807H Brassica oleracea HOM05D008190 ORTHO05D010344 2.1e-20 102.1 72 70.8
BolC1t03808H Brassica oleracea HOM05D008190 ORTHO05D010344 2.1e-20 102.1 72 70.8
A01p30280 Brassica napus HOM05D008190 ORTHO05D010344 1.8e-19 99.0 73 67.1
BraA01t03163Z Brassica rapa HOM05D008190 ORTHO05D010344 1.8e-19 99.0 73 67.1
A01p30270 Brassica napus HOM05D008190 ORTHO05D010344 3.9e-19 97.8 72 69.4
BraA01t03162Z Brassica rapa HOM05D008190 ORTHO05D010344 3.9e-19 97.8 72 69.4
AL2G14700 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 5.1e-19 97.4 76 65.8
C01p38410 Brassica napus HOM05D008190 ORTHO05D010344 5.1e-19 97.4 72 69.4
AL2G14690 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 1.1e-18 96.3 73 64.4
AT2G22055 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 1.5e-18 95.9 73 65.8
BcaC04g22340 Brassica carinata HOM05D008190 ORTHO05D010344 3.3e-18 94.7 80 62.5
C09p20430 Brassica napus HOM05D008190 ORTHO05D010344 3.3e-18 94.7 80 62.5
BolC9t54947H Brassica oleracea HOM05D008190 ORTHO05D010344 3.3e-18 94.7 80 62.5
Carub.0002s0363 Capsella rubella HOM05D008190 ORTHO05D010344 5.7e-18 94.0 72 65.3
CARHR050840 Cardamine hirsuta HOM05D008190 ORTHO05D010344 8.2e-17 90.1 77 57.1
AT1G61563 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 1.4e-16 89.4 81 59.3
BcaB04g20341 Brassica carinata HOM05D008190 ORTHO05D010344 1.8e-16 89.0 57 73.7
Carub.0002s0365 Capsella rubella HOM05D008190 ORTHO05D010344 2.4e-16 88.6 73 63.0
CARHR050830 Cardamine hirsuta HOM05D008190 ORTHO05D010344 2.4e-16 88.6 73 58.9
AL8G22740 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 7.0e-16 87.0 74 58.1
Thhalv10024096m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 9.1e-16 86.7 73 58.9
AL2G14720 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 1.3e-14 82.8 76 57.9
BcaC03g13507 Brassica carinata HOM05D008190 ORTHO05D010344 1.3e-14 82.8 72 59.7
BolC2t06606H Brassica oleracea HOM05D008190 ORTHO05D010344 1.3e-14 82.8 72 59.7
A02p02380 Brassica napus HOM05D008190 ORTHO05D010344 2.9e-14 81.6 72 58.3
BraA02t05208Z Brassica rapa HOM05D008190 ORTHO05D010344 2.9e-14 81.6 72 58.3
BcaC09g50377 Brassica carinata HOM05D008190 ORTHO05D010344 3.8e-14 81.3 72 58.3
Thhalv10024053m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 8.5e-14 80.1 72 55.6
Aa31LG2G9270 Aethionema arabicum HOM05D008190 ORTHO05D010344 4.2e-13 77.8 72 56.9
C02p06600 Brassica napus HOM05D008190 ORTHO05D010344 1.2e-12 76.3 73 54.8
ClCG03G017300 Citrullus lanatus HOM05D009824 ORTHO05D010344 2.2e-06 55.5 72 43.1
CARHR126820 Cardamine hirsuta HOM05D010425 ORTHO05D014400 3.8e-06 54.7 64 39.1


User provided reference genes

Program Settings