Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-282 973.8 483 100.0
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-86 324.3 320 59.4
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-81 306.6 319 56.7
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 5.0e-77 292.7 319 54.2
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 4.3e-76 289.7 294 57.5
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-75 287.0 319 53.6
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-69 266.2 331 50.5
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-65 255.0 322 48.4
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-64 249.6 312 49.0
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 5.1e-61 239.6 271 53.1
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-59 234.6 315 49.2
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 8.1e-59 232.3 332 47.9
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-58 231.1 320 45.6
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-58 229.6 312 46.2
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 4.4e-57 226.5 319 44.2
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-57 225.7 322 45.0
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 9.9e-57 225.3 311 45.7
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 4.2e-55 219.9 312 43.9
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 2.7e-54 217.2 312 43.6
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-53 213.0 332 43.4
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 4.8e-51 206.5 317 42.6
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 3.1e-50 203.8 323 40.9
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-49 201.8 320 42.2
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-49 201.4 313 44.4
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-48 197.2 316 42.1
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-47 195.3 308 42.2
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-47 194.5 212 56.1
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-47 193.7 313 42.2
BcaB08g37273 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-47 193.0 268 47.8
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 6.0e-46 189.5 319 42.6
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 8.7e-45 185.7 246 49.2
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-44 184.5 300 41.7
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-44 183.7 307 40.4
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 9.6e-44 182.2 317 41.6
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-43 181.8 135 75.6
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-43 181.0 326 40.2
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-42 176.4 324 40.1
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 1.1e-39 168.7 323 38.7
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 6.0e-38 162.9 284 39.8
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-37 162.2 298 38.6
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-36 158.3 218 48.2
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-33 148.3 309 35.6
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 2.0e-33 147.9 218 44.0
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 8.4e-32 142.5 158 53.2
BcaC03g14601 Brassica carinata HOM05D000496 ORTHO05D027466 1.1e-31 142.1 185 49.2
BolC2t08174H Brassica oleracea HOM05D000496 ORTHO05D027466 1.1e-31 142.1 185 49.2
BcaC09g48708 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-30 137.5 204 41.2
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-30 137.1 313 35.8
BolC7t44304H Brassica oleracea HOM05D000496 ORTHO05D027466 1.8e-29 134.8 130 57.7
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-29 132.9 318 34.9
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 8.7e-29 132.5 189 45.5
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 1.1e-28 132.1 251 38.6
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-28 131.7 146 53.4
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 4.0e-26 123.6 116 57.8
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-25 120.2 310 33.5
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-25 119.4 204 42.6
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-24 119.0 324 33.6
BolC2t10251H Brassica oleracea HOM05D000496 ORTHO05D000411 1.0e-24 119.0 146 50.7
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-24 118.6 336 31.8
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-24 117.5 311 33.8
BcaC06g36695 Brassica carinata HOM05D000627 ORTHO05D000365 3.8e-24 117.1 128 52.3
BcaNung03852 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-24 117.1 89 61.8
BcaNung02556 Brassica carinata HOM05D000496 ORTHO05D095281 6.5e-24 116.3 101 69.3
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 2.5e-23 114.4 153 45.1
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 3.2e-23 114.0 252 36.9
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-22 110.5 331 29.9
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 3.0e-21 107.5 144 46.5
BcaC01g01240 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-21 107.1 66 80.3
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 1.1e-20 105.5 189 37.6
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 1.1e-20 105.5 144 46.5
BcaC02g10789 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-20 104.8 336 30.4
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 9.7e-20 102.4 180 37.2
BcaC06g36146 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-20 102.4 319 33.5
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 9.7e-20 102.4 185 36.8
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 9.7e-20 102.4 185 36.8
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-19 100.9 320 30.9
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 2.8e-19 100.9 288 31.9
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 2.8e-19 100.9 288 31.9
BcaNung02816 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-19 100.5 329 31.9
BcaB06g27378 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-19 99.8 300 32.7
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-19 99.4 361 29.6
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 2.4e-18 97.8 173 38.7
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 2.4e-18 97.8 206 36.4
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-18 96.7 312 34.0
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-18 96.7 322 32.3
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-18 96.3 359 30.9
BcaC05g27417 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-18 96.3 299 33.8
BcaC07g37066 Brassica carinata HOM05D000496 ORTHO05D039815 6.9e-18 96.3 317 30.9
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-17 95.1 325 29.8
BcaC06g35493 Brassica carinata HOM05D010392 ORTHO05D000411 2.6e-17 94.4 308 32.8
BolC8t48398H Brassica oleracea HOM05D000496 ORTHO05D000411 2.6e-17 94.4 329 28.3
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-16 90.9 305 29.2
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 3.8e-16 90.5 303 29.7
BcaC09g48801 Brassica carinata HOM05D000496 ORTHO05D090764 3.8e-16 90.5 318 28.9
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 5.0e-16 90.1 132 43.9
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-16 89.4 315 29.8
BcaB05g23273 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-16 89.4 316 31.6
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 8.5e-16 89.4 132 43.2
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 1.4e-15 88.6 140 37.9
BcaC06g36694 Brassica carinata HOM05D000496 ORTHO05D094614 7.2e-15 86.3 106 49.1
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 2.1e-14 84.7 327 26.3
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-14 84.3 190 35.3
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-14 84.3 84 53.6
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-14 84.3 57 68.4
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-14 82.8 326 27.3
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 1.4e-13 82.0 137 41.6
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 2.3e-13 81.3 144 41.7
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-13 80.9 136 40.4
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 1.1e-12 79.0 129 40.3
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-12 78.2 299 26.1
BcaC05g28479 Brassica carinata HOM05D023072 ORTHO05D000411 3.3e-12 77.4 296 29.4
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 5.7e-12 76.6 86 52.3
BolC7t42802H Brassica oleracea HOM05D000496 ORTHO05D104510 1.7e-11 75.1 191 29.8
BcaC09g50172 Brassica carinata HOM05D025630 ORTHO05D032542 2.2e-11 74.7 181 37.6
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 2.8e-11 74.3 197 32.0
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 4.8e-11 73.6 58 58.6
BolSC21t60241H Brassica oleracea HOM05D000496 ORTHO05D031790 4.8e-11 73.6 71 47.9
C05p49720 Brassica napus HOM05D000496 ORTHO05D000411 6.3e-11 73.2 86 50.0
C08p18460 Brassica napus HOM05D000496 ORTHO05D042898 6.3e-11 73.2 162 34.6
BcaC06g36471 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-10 72.4 75 48.0
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 1.4e-10 72.0 126 40.5
BcaB06g26352 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-10 70.5 75 50.7
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-10 70.5 52 63.5
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 4.1e-10 70.5 147 38.1
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 1.2e-09 68.9 110 41.8
BcaC01g00867 Brassica carinata HOM05D010392 ORTHO05D040019 1.5e-09 68.6 345 27.0
BcaC01g02149 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-09 68.6 50 62.0
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 2.0e-09 68.2 74 52.7
C06p36470 Brassica napus HOM05D030143 ORTHO05D039637 4.5e-09 67.0 74 52.7
BcaB08g35386 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-09 66.6 73 47.9
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-09 66.2 101 42.6
BcaC03g15569 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-08 65.9 309 25.9
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-08 65.5 314 25.5
BcaC04g21355 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-08 65.5 303 27.4
BcaB01g01320 Brassica carinata HOM05D030143 ORTHO05D092293 1.1e-07 62.4 109 42.2
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 1.4e-07 62.0 125 37.6
C09p62330 Brassica napus HOM05D058036 ORTHO05D032289 1.4e-07 62.0 59 57.6
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 1.4e-07 62.0 125 37.6
BcaC04g22137 Brassica carinata HOM05D000496 ORTHO05D019920 1.9e-07 61.6 61 55.7
BraA09t39002Z Brassica rapa HOM05D000496 ORTHO05D000411 1.9e-07 61.6 52 59.6
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 4.2e-07 60.5 132 37.1
C02p20400 Brassica napus HOM05D022631 ORTHO05D024363 5.5e-07 60.1 81 46.9
BcaB07g33944 Brassica carinata HOM05D010392 ORTHO05D000411 7.2e-07 59.7 422 25.1
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 7.2e-07 59.7 245 26.5
BraA01t02806Z Brassica rapa HOM05D022631 ORTHO05D024363 7.2e-07 59.7 106 37.7
BcaC05g28859 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-07 59.3 44 68.2
BolC2t08173H Brassica oleracea HOM05D022631 ORTHO05D024363 1.6e-06 58.5 81 45.7
BcaC02g08909 Brassica carinata HOM05D010392 ORTHO05D000411 2.1e-06 58.2 104 37.5
BcaC02g10795 Brassica carinata HOM05D017621 ORTHO05D000411 2.1e-06 58.2 162 34.6
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-06 58.2 128 36.7
BolC3t19455H Brassica oleracea HOM05D000496 ORTHO05D032668 2.1e-06 58.2 175 31.4
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 6.1e-06 56.6 209 28.2
BcaC02g10796 Brassica carinata HOM05D017621 ORTHO05D091941 6.1e-06 56.6 110 40.9


User provided reference genes

Program Settings