Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22158 Brassica carinata HOM05D011864 ORTHO05D015480 9.2e-142 506.9 260 100.0
BcaC01g01731 Brassica carinata HOM05D000675 ORTHO05D003044 2.3e-60 236.5 138 88.4
C09p22720 Brassica napus HOM05D000675 ORTHO05D003044 1.4e-57 227.3 135 88.9
C03p72520 Brassica napus HOM05D000675 ORTHO05D011634 6.3e-50 201.8 110 93.6
C09p22730 Brassica napus HOM05D011864 ORTHO05D015480 1.0e-47 194.5 102 99.0
BolC9t55190H Brassica oleracea HOM05D011864 ORTHO05D015480 1.0e-47 194.5 102 99.0
BcaC01g01730 Brassica carinata HOM05D011864 ORTHO05D015480 5.0e-47 192.2 102 98.0
C03p72510 Brassica napus HOM05D011864 ORTHO05D015480 5.0e-47 192.2 102 98.0
BcaB02g11266 Brassica carinata HOM05D000675 ORTHO05D011634 3.1e-41 172.9 142 69.7
C05p17940 Brassica napus HOM05D000675 ORTHO05D011634 2.7e-40 169.9 169 59.8
BraA09t40504Z Brassica rapa HOM05D000675 ORTHO05D011634 3.5e-40 169.5 133 69.9
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 5.0e-39 165.6 95 90.5
BolC5t30501H Brassica oleracea HOM05D000675 ORTHO05D011634 2.5e-38 163.3 169 58.6
BcaC05g25846 Brassica carinata HOM05D000675 ORTHO05D011634 9.4e-38 161.4 166 59.0
A04p10400 Brassica napus HOM05D011864 ORTHO05D015480 2.8e-34 149.8 102 78.4
BcaC05g26493 Brassica carinata HOM05D011864 ORTHO05D015480 1.1e-33 147.9 102 81.4
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-30 136.3 127 62.2
C05p25430 Brassica napus HOM05D011864 ORTHO05D015480 4.0e-28 129.4 74 91.9
BcaB05g22797 Brassica carinata HOM05D000675 ORTHO05D003044 1.0e-20 104.8 156 46.2
BcaB02g11267 Brassica carinata HOM05D011864 ORTHO05D092410 2.3e-20 103.6 84 66.7
BcaB07g31727 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-19 101.3 143 46.9
C09p12140 Brassica napus HOM05D000675 ORTHO05D011634 1.2e-19 101.3 86 66.3
BcaB04g18178 Brassica carinata HOM05D000675 ORTHO05D011634 6.4e-18 95.5 141 46.8
C09p57870 Brassica napus HOM05D000675 ORTHO05D011634 9.2e-17 91.7 128 47.7
A02p23320 Brassica napus HOM05D000675 ORTHO05D011634 1.6e-16 90.9 100 55.0
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-16 90.5 172 41.3
BcaB05g24759 Brassica carinata HOM05D000675 ORTHO05D000395 6.0e-16 89.0 311 29.3
BraA03t12020Z Brassica rapa HOM05D011864 ORTHO05D015480 6.0e-16 89.0 47 95.7
BcaB01g03783 Brassica carinata HOM05D011864 ORTHO05D015480 3.0e-15 86.7 61 72.1
BcaC01g00314 Brassica carinata HOM05D000675 ORTHO05D000395 3.0e-15 86.7 133 46.6
BraA08t34265Z Brassica rapa HOM05D011864 ORTHO05D015480 3.0e-15 86.7 47 93.6
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 6.6e-15 85.5 210 36.7
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 2.5e-14 83.6 178 39.9
BcaB02g11371 Brassica carinata HOM05D000675 ORTHO05D011634 5.6e-14 82.4 176 36.4
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 9.5e-14 81.6 165 39.4
A01p24790 Brassica napus HOM05D000675 ORTHO05D011634 9.5e-14 81.6 86 58.1
BolC3t20079H Brassica oleracea HOM05D000675 ORTHO05D027218 2.8e-13 80.1 141 44.7
BcaB08g35197 Brassica carinata HOM05D000675 ORTHO05D011634 6.2e-13 79.0 137 43.1
BcaB03g11987 Brassica carinata HOM05D011864 ORTHO05D000395 1.4e-12 77.8 91 61.5
BcaC01g02627 Brassica carinata HOM05D000675 ORTHO05D013510 3.1e-12 76.6 187 34.8
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 6.8e-12 75.5 155 39.4
A01p19470 Brassica napus HOM05D000675 ORTHO05D021814 1.2e-11 74.7 192 34.4
A02p36620 Brassica napus HOM05D000675 ORTHO05D021814 1.5e-11 74.3 192 33.9
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 1.5e-11 74.3 192 33.9
C06p36620 Brassica napus HOM05D000675 ORTHO05D000395 2.6e-11 73.6 170 34.1
A09p30130 Brassica napus HOM05D000675 ORTHO05D000395 4.4e-11 72.8 177 35.0
C06p32580 Brassica napus HOM05D000675 ORTHO05D021814 5.8e-11 72.4 166 36.1
C06p13250 Brassica napus HOM05D000675 ORTHO05D032234 7.5e-11 72.0 138 37.7
BraA09t41065Z Brassica rapa HOM05D011864 ORTHO05D015480 7.5e-11 72.0 38 97.4
BolC6t36483H Brassica oleracea HOM05D000675 ORTHO05D032234 9.8e-11 71.6 138 37.7
BolC6t38380H Brassica oleracea HOM05D000675 ORTHO05D021814 2.2e-10 70.5 189 34.9
A03p67550 Brassica napus HOM05D000675 ORTHO05D027218 2.9e-10 70.1 122 40.2
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 2.9e-10 70.1 122 40.2
BolC1t04292H Brassica oleracea HOM05D000675 ORTHO05D013510 3.7e-10 69.7 125 40.8
BcaB02g11112 Brassica carinata HOM05D000675 ORTHO05D000395 6.4e-10 68.9 174 34.5
BcaC08g43931 Brassica carinata HOM05D000675 ORTHO05D032234 6.4e-10 68.9 132 37.9
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 1.4e-09 67.8 230 30.9
BcaC09g49036 Brassica carinata HOM05D000675 ORTHO05D013510 1.9e-09 67.4 160 34.4
BcaC09g49894 Brassica carinata HOM05D000675 ORTHO05D013510 1.9e-09 67.4 176 33.0
BcaB04g16995 Brassica carinata HOM05D000675 ORTHO05D003044 4.1e-09 66.2 179 34.1
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 7.0e-09 65.5 221 33.5
BcaB04g17899 Brassica carinata HOM05D000675 ORTHO05D011634 9.2e-09 65.1 167 32.3
BcaC06g36056 Brassica carinata HOM05D000675 ORTHO05D013510 1.2e-08 64.7 163 33.7
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-08 64.3 168 33.9
C08p03650 Brassica napus HOM05D000675 ORTHO05D003044 1.6e-08 64.3 108 40.7
BcaB01g01871 Brassica carinata HOM05D000675 ORTHO05D011634 2.1e-08 63.9 186 30.6
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-08 63.9 152 36.8
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 2.7e-08 63.5 277 27.4
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 3.5e-08 63.2 154 37.0
BolC1t03092H Brassica oleracea HOM05D000675 ORTHO05D003044 3.5e-08 63.2 126 38.1
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 4.6e-08 62.8 149 36.2
BcaB05g22464 Brassica carinata HOM05D000675 ORTHO05D027218 6.0e-08 62.4 108 42.6
C04p36550 Brassica napus HOM05D000675 ORTHO05D011634 7.8e-08 62.0 152 34.9
C07p27890 Brassica napus HOM05D000675 ORTHO05D000395 1.3e-07 61.2 102 41.2
BcaB01g01024 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-07 60.8 102 33.3
BcaB01g02521 Brassica carinata HOM05D000675 ORTHO05D011634 1.7e-07 60.8 198 30.3
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-07 60.5 160 32.5
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 2.3e-07 60.5 159 32.7
BcaB07g33523 Brassica carinata HOM05D000675 ORTHO05D011634 3.0e-07 60.1 167 34.1
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 3.0e-07 60.1 157 33.8
BcaC05g26675 Brassica carinata HOM05D000675 ORTHO05D002086 3.9e-07 59.7 102 32.4
BcaC08g43930 Brassica carinata HOM05D011864 ORTHO05D032924 3.9e-07 59.7 80 35.0
C06p13230 Brassica napus HOM05D000675 ORTHO05D032924 3.9e-07 59.7 80 35.0
BolC5t33353H Brassica oleracea HOM05D000675 ORTHO05D013510 3.9e-07 59.7 112 38.4
BolC6t36481H Brassica oleracea HOM05D000675 ORTHO05D032924 3.9e-07 59.7 80 35.0
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 5.0e-07 59.3 150 34.0
BolC6t35505H Brassica oleracea HOM05D000675 ORTHO05D000395 5.0e-07 59.3 156 31.4
BcaB01g04056 Brassica carinata HOM05D000675 ORTHO05D011634 6.6e-07 58.9 284 23.9
C07p08420 Brassica napus HOM05D000675 ORTHO05D013510 1.5e-06 57.8 141 34.0
C03p58380 Brassica napus HOM05D000675 ORTHO05D000395 1.9e-06 57.4 179 31.8
C04p30840 Brassica napus HOM05D000675 ORTHO05D031737 1.9e-06 57.4 111 44.1
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-06 57.0 148 34.5
BcaB01g03290 Brassica carinata HOM05D000675 ORTHO05D003044 7.3e-06 55.5 152 38.2
BcaB03g16529 Brassica carinata HOM05D000675 ORTHO05D003044 9.5e-06 55.1 99 32.3


User provided reference genes

Program Settings